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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001583.1-P
Bra001665.1-P
Bra002654.1-P
Bra002712.1-P
Bra006809.1-P
Bra009003.1-P
Bra010263.1-P
Bra010783.1-P
Bra010841.1-P
Bra011236.1-P
Bra013340.1-P
Bra013799.1-P
Bra014124.1-P
Bra018319.1-P
Bra020371.1-P
Bra020996.1-P
Bra021628.1-P
Bra022219.1-P
Bra022794.1-P
Bra024032.1-P
Bra025613.1-P
Bra027280.1-P
Bra027311.1-P
Bra032042.1-P
Bra032246.1-P
Bra032374.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G47100.1 Bra010841.1-P AT1G29230.1 14730064
AT5G47100.1 Bra010841.1-P AT1G29230.1 14730130
AT5G47100.1 Bra010783.1-P AT1G30270.1 14730064
AT5G47100.1 Bra032374.1-P AT1G30270.1 14730064
AT5G47100.1 Bra010783.1-P AT1G30270.1 16814720
AT5G47100.1 Bra032374.1-P AT1G30270.1 16814720
AT5G47100.1 Bra010783.1-P AT1G30270.1 17898163
AT5G47100.1 Bra032374.1-P AT1G30270.1 17898163
AT5G47100.1 Bra014124.1-P AT1G48260.1 14730064
AT5G47100.1 Bra032246.1-P AT1G48260.1 14730064
AT5G47100.1 Bra032042.1-P AT2G25090.1 14730064
AT5G47100.1 Bra032042.1-P AT2G25090.1 17898163
AT5G47100.1 Bra018319.1-P AT2G30360.1 14730064
AT5G47100.1 Bra021628.1-P AT2G30360.1 14730064
AT5G47100.1 Bra022794.1-P AT2G30360.1 14730064
AT5G47100.1 Bra027311.1-P AT2G30360.1 14730064
AT5G47100.1 Bra018319.1-P AT2G30360.1 21798944
AT5G47100.1 Bra021628.1-P AT2G30360.1 21798944
AT5G47100.1 Bra022794.1-P AT2G30360.1 21798944
AT5G47100.1 Bra027311.1-P AT2G30360.1 21798944
AT5G47100.1 Bra001583.1-P AT3G15090.1 21798944
AT5G47100.1 Bra027280.1-P AT3G15090.1 21798944
AT5G47100.1 Bra001665.1-P AT3G17510.1 14730064
AT5G47100.1 Bra022219.1-P AT3G17510.1 14730064
AT5G47100.1 Bra001665.1-P AT3G17510.1 17092313
AT5G47100.1 Bra022219.1-P AT3G17510.1 17092313
AT5G47100.1 Bra013340.1-P AT4G18700.1 14730064
AT5G47100.1 Bra020996.1-P AT4G18700.1 14730064
AT5G47100.1 Bra013799.1-P AT4G24400.1 14730064
AT5G47100.1 Bra010263.1-P AT4G30960.1 17898163
AT5G47100.1 Bra011236.1-P AT4G30960.1 17898163
AT5G47100.1 Bra024032.1-P AT4G30960.1 17898163
AT5G47100.1 Bra009003.1-P AT5G10930.1 14730064
AT5G47100.1 Bra025613.1-P AT5G35410.1 14730064
AT5G47100.1 Bra002712.1-P AT5G57630.1 14730064
AT5G47100.1 Bra006809.1-P AT5G57630.1 14730064
AT5G47100.1 Bra002654.1-P AT5G58380.1 14730064
AT5G47100.1 Bra020371.1-P AT5G58380.1 14730064
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28977 Canola cytosol 100.0 100.0
Bra017504.1-P Field mustard cytosol 98.59 98.59
CDY40580 Canola cytosol 98.59 98.59
AT5G47100.1 Thale cress cytosol 97.65 97.65
Bra012655.1-P Field mustard cytosol 90.61 90.61
Bra040169.1-P Field mustard cytosol 90.14 90.14
VIT_02s0236g00140.t01 Wine grape cytosol 84.98 84.98
PGSC0003DMT400068352 Potato cytosol 81.69 80.93
VIT_02s0236g00150.t01 Wine grape cytosol 83.57 79.82
Solyc08g077770.2.1 Tomato cytosol 79.81 79.81
PGSC0003DMT400011576 Potato cytosol 79.81 79.81
Zm00001d029976_P004 Maize cytosol, mitochondrion 78.4 78.4
EER94470 Sorghum cytosol 78.4 78.4
Os10t0564800-01 Rice plasma membrane 78.4 78.4
KRH57533 Soybean mitochondrion 77.93 77.93
GSMUA_AchrUn_... Banana cytosol 77.0 77.0
TraesCS1A01G215800.1 Wheat cytosol 77.0 76.28
TraesCS1B01G229300.1 Wheat cytosol 77.0 76.28
TraesCSU01G178500.1 Wheat cytosol 77.0 76.28
HORVU1Hr1G055300.1 Barley cytosol 77.0 76.28
GSMUA_Achr4P26350_001 Banana cytosol 75.59 75.59
GSMUA_Achr4P30070_001 Banana cytosol 75.59 75.59
Solyc06g060980.1.1 Tomato cytosol, mitochondrion 74.65 73.95
KRH28207 Soybean cytosol 73.24 73.58
TraesCSU01G129500.1 Wheat cytosol, mitochondrion 74.18 73.15
HORVU4Hr1G090270.10 Barley cytosol 73.71 72.35
Solyc08g007160.2.1 Tomato cytosol 72.3 71.63
TraesCS5A01G545500.2 Wheat cytosol 72.3 71.63
TraesCS4B01G379200.1 Wheat cytosol 67.61 70.94
KRH04244 Soybean cytosol 69.48 67.58
Zm00001d000046_P001 Maize cytosol 51.17 61.93
Bra009743.1-P Field mustard cytosol 62.91 60.63
Bra026462.1-P Field mustard cytosol 61.97 59.73
Bra029396.1-P Field mustard cytosol 60.56 58.37
Bra035598.1-P Field mustard cytosol 60.56 57.08
Bra026421.1-P Field mustard cytosol 57.75 56.42
Bra011404.1-P Field mustard cytosol, plastid 53.52 54.03
PGSC0003DMT400052805 Potato cytosol 65.73 53.64
Bra028949.1-P Field mustard cytosol 53.99 52.27
Bra027703.1-P Field mustard mitochondrion 52.11 51.87
Bra002301.1-P Field mustard cytosol 24.88 48.18
Bra034543.1-P Field mustard cytosol 54.93 47.56
Bra037030.1-P Field mustard cytosol 54.46 44.96
Bra026422.1-P Field mustard cytosol, plastid 45.07 38.4
Protein Annotations
EnsemblPlants:Bra022104.1EnsemblPlants:Bra022104.1-PEnsemblPlantsGene:Bra022104Gene3D:1.10.238.10GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR23056
PANTHER:PTHR23056:SF41PFAM:PF13202PFscan:PS50222PRINTS:PR00450ScanProsite:PS00018SMART:SM00054
SUPFAM:SSF47473UniParc:UPI0002546129UniProt:M4E007MapMan:35.1::
Description
AT5G47100 (E=3e-116) CBL9 | CBL9; calcium ion binding
Coordinates
chrA02:-:19402928..19404635
Molecular Weight (calculated)
24351.9 Da
IEP (calculated)
4.366
GRAVY (calculated)
-0.170
Length
213 amino acids
Sequence
(BLAST)
001: MGCLHSTAAR EFPGHENPVK LASETAFSVS EVEALYELFK SISSSVVDDG LINKEEFQLA LFKNRKKENL FANRIFDLFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEEKTD FTFRLYDMDC TGFIERQEVK QMLIALLCES EMKLADDTIE VILDQTFEDA DVDRDGKIGK TEWSDFVIKN PSLLKIMTLP YLRDITTTFP
201: SFVFNSEVDE IAT
Best Arabidopsis Sequence Match ( AT5G47100.1 )
(BLAST)
001: MGCFHSTAAR EFPDHENPVK LASETAFSVS EVEALYELFK SISSSVVDDG LINKEEFQLA LFKNRKKENL FANRIFDLFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEEKTD FTFRLYDMDC TGFIERQEVK QMLIALLCES EMKLADDTIE MILDQTFEDA DVDRDGKIDK TEWSNFVIKN PSLLKIMTLP YLRDITTTFP
201: SFVFNSEVDE IAT
Arabidopsis Description
CBL9Calcineurin B-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTB8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.