Factsheet for Bra020996.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003649.1-P
Bra008355.1-P
Bra012325.1-P
Bra016380.1-P
Bra017504.1-P
Bra022104.1-P
Bra028187.1-P
Bra028409.1-P
Bra028949.1-P
Bra035027.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18700.1	Bra003649.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra008355.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra012325.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra016380.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra035027.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra028187.1-P	AT5G38480.1	21798944
AT4G18700.1	Bra028409.1-P	AT5G38480.1	21798944
AT4G18700.1	Bra017504.1-P	AT5G47100.1	14730064
AT4G18700.1	Bra022104.1-P	AT5G47100.1	14730064
AT4G18700.1	Bra028949.1-P	AT5G55990.1	11230129
AT4G18700.1	Bra028949.1-P	AT5G55990.1	14730130
AT4G18700.1	Bra028949.1-P	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69878	Canola	cytosol	87.5	99.07
AT4G18700.1	Thale cress	cytosol	90.57	90.39
Bra013340.1-P	Field mustard	cytosol	91.39	90.28
VIT_10s0003g01420.t01	Wine grape	cytosol	77.46	80.43
CDY34052	Canola	cytosol	81.56	78.66
Bra025052.1-P	Field mustard	cytosol	77.05	78.17
Solyc02g072530.1.1	Tomato	cytosol	73.98	75.52
PGSC0003DMT400073132	Potato	cytosol	73.77	75.31
KRH11038	Soybean	cytosol	76.64	73.33
KRH21248	Soybean	cytosol	76.02	72.46
GSMUA_Achr6P14530_001	Banana	cytosol, mitochondrion	56.56	68.83
KRH58970	Soybean	cytosol	72.54	68.47
KRH42869	Soybean	cytosol	72.75	67.23
HORVU6Hr1G054210.3	Barley	cytosol	60.04	66.89
Bra005447.1-P	Field mustard	cytosol, mitochondrion, plastid	64.55	64.02
Bra005446.1-P	Field mustard	mitochondrion	63.73	63.99
Bra010841.1-P	Field mustard	cytosol, plastid	68.65	63.93
Zm00001d038690_P001	Maize	cytosol	65.57	63.62
OQU78296	Sorghum	plastid	65.16	62.85
Os05t0514200-01	Rice	cytosol, plastid	64.96	62.4
Zm00001d010743_P001	Maize	cytosol, plastid	64.96	62.28
HORVU1Hr1G076910.3	Barley	cytosol, plastid	64.34	61.57
Bra021897.1-P	Field mustard	plastid	64.34	61.33
TraesCS1B01G347100.1	Wheat	plastid	64.55	60.69
TraesCS1A01G333800.1	Wheat	plastid	64.55	60.46
TraesCS3A01G305900.1	Wheat	plastid	64.14	59.96
TraesCS3B01G330600.1	Wheat	plastid	64.14	59.62
EES03646	Sorghum	plastid	63.11	59.34
EES02274	Sorghum	cytosol	60.04	57.0
Os01t0759400-02	Rice	cytosol, plastid	62.91	56.85
Zm00001d012696_P001	Maize	plastid	60.04	56.67
Bra024032.1-P	Field mustard	cytosol	50.41	56.29
HORVU3Hr1G025810.1	Barley	cytosol	58.81	56.16
Bra021992.1-P	Field mustard	cytosol	49.8	55.86
Bra011236.1-P	Field mustard	cytosol	50.2	55.56
Zm00001d008899_P001	Maize	cytosol	58.61	55.53
TraesCS3B01G153800.1	Wheat	mitochondrion	59.02	55.49
Zm00001d043389_P003	Maize	cytosol, plastid	62.3	55.47
TraesCS3D01G136700.1	Wheat	mitochondrion	59.02	55.38
Bra010263.1-P	Field mustard	cytosol	48.98	55.32
TraesCS3D01G296000.1	Wheat	plastid	39.96	55.24
Bra027311.1-P	Field mustard	cytosol	41.39	55.04
Os01t0206300-00	Rice	cytosol	57.58	54.99
TraesCS3A01G135700.1	Wheat	mitochondrion	58.61	54.79
Bra022794.1-P	Field mustard	cytosol	47.54	54.33
HORVU3Hr1G073100.2	Barley	cytosol	63.73	53.99
Bra020371.1-P	Field mustard	cytosol	48.36	53.27
Bra018319.1-P	Field mustard	cytosol	47.54	52.49
Bra021628.1-P	Field mustard	cytosol	41.19	52.48
Bra009293.1-P	Field mustard	cytosol	49.59	52.04
Bra002654.1-P	Field mustard	cytosol	49.18	51.95
Bra009003.1-P	Field mustard	cytosol	46.11	51.84
Bra028912.1-P	Field mustard	cytosol	38.52	50.95
Bra028709.1-P	Field mustard	cytosol	45.08	50.11
Bra009294.1-P	Field mustard	cytosol	44.88	49.77
Bra005103.1-P	Field mustard	cytosol	43.03	49.18
Bra000066.1-P	Field mustard	cytosol	42.83	48.6
Bra025051.1-P	Field mustard	cytosol	34.22	47.44
Bra032042.1-P	Field mustard	cytosol	43.03	45.55

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	EnsemblPlantsGene:Bra020996	EnsemblPlants:Bra020996.1	EnsemblPlants:Bra020996.1-P	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M4DWV0	InterPro:NAF/FISL_domain	InterPro:NAF_dom
PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254729C	SEG:seg	:	:

Description

AT4G18700 (E=7e-235) CIPK12, SnRK3.9, ATWL4, WL4 | CIPK12 (CBL-INTERACTING PROTEIN KINASE 12); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA08:-:10678920..10680386

Molecular Weight (calculated)

55034.3 Da

IEP (calculated)

7.170

GRAVY (calculated)

-0.261

Length

488 amino acids

Sequence
(BLAST)

001: MSDLKRETSL PKERTSPPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEDAARRYFQ QLISAVTFCH ARGVYHRDLK PENLLLDEKG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARR
201: GYDAAKVDIW SCGVVLFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS PELTRLMSRL LETDPEKRFT FAEVMENSWF KKGFKHVKFY VEDDKLCNVD
301: DDDDELETAS VESGRSSAVS ESEIECLEPR RKVVGLPRPA SLNAFDIISF SQGFDLSGLF DDDGEGSRFV SGAPVSKIIS KLEEIAKVVS FTVRKKDCRV
401: SLEGSRQGVK GPLTIAAEIF ELTPSLVVVE VKKKGGDRAE YEEFCNNELK PMLQNLRADE VEEPVAVSVV DDETVNSPPV CFLPSDTE

Best Arabidopsis Sequence Match ( AT4G18700.1 )
(BLAST)

001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE

Arabidopsis Description

CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.