Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX88436 | Canola | cytosol | 99.23 | 99.23 |
Bra003649.1-P | Field mustard | cytosol | 95.77 | 95.77 |
Bra008355.1-P | Field mustard | cytosol | 90.38 | 94.0 |
AT1G78300.1 | Thale cress | cytosol | 93.08 | 93.44 |
Bra028068.1-P | Field mustard | cytosol | 88.46 | 88.12 |
CDX87455 | Canola | cytosol | 99.62 | 86.62 |
PGSC0003DMT400041810 | Potato | cytosol | 83.85 | 84.5 |
PGSC0003DMT400060654 | Potato | cytosol | 82.31 | 83.92 |
Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 81.92 | 83.53 |
Bra016380.1-P | Field mustard | cytosol | 83.08 | 83.4 |
Bra034430.1-P | Field mustard | cytosol | 83.85 | 82.89 |
Bra040592.1-P | Field mustard | cytosol | 81.92 | 81.61 |
Bra028409.1-P | Field mustard | cytosol | 80.77 | 81.4 |
Bra001049.1-P | Field mustard | cytosol | 81.54 | 81.23 |
Bra012325.1-P | Field mustard | cytosol | 81.54 | 80.61 |
Bra028187.1-P | Field mustard | cytosol | 79.23 | 80.16 |
Solyc11g010200.1.1 | Tomato | nucleus | 80.38 | 77.7 |
Bra024384.1-P | Field mustard | cytosol | 71.54 | 75.0 |
Bra037818.1-P | Field mustard | cytosol | 71.15 | 74.3 |
Bra006061.1-P | Field mustard | cytosol | 70.77 | 73.31 |
Bra028586.1-P | Field mustard | cytosol | 71.15 | 67.27 |
Bra031383.1-P | Field mustard | cytosol | 63.46 | 65.22 |
Bra024713.1-P | Field mustard | cytosol | 66.54 | 64.79 |
Bra016273.1-P | Field mustard | cytosol | 66.54 | 64.07 |
Bra000268.1-P | Field mustard | cytosol | 61.92 | 61.45 |
Zm00001d013429_P001 | Maize | extracellular | 26.15 | 58.62 |
KRH05108 | Soybean | cytosol | 35.77 | 58.49 |
Bra012455.1-P | Field mustard | cytosol | 58.46 | 49.84 |
GSMUA_Achr3P17880_001 | Banana | cytosol | 32.69 | 48.3 |
Bra035020.1-P | Field mustard | cytosol | 42.31 | 44.9 |
VIT_00s0199g00140.t01 | Wine grape | cytosol | 53.46 | 23.92 |
Protein Annotations
Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
EnsemblPlantsGene:Bra035027 | EnsemblPlants:Bra035027.1 | EnsemblPlants:Bra035027.1-P | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0019904 | InterPro:IPR036815 | UniProt:M4F1T0 | PFAM:PF00244 | PIRSF:PIRSF000868 |
PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 | SMART:SM00101 |
SUPFAM:SSF48445 | UniParc:UPI0002541BF0 | : | : | : | : |
Description
AT1G78300 (E=3e-134) GRF2, 14-3-3OMEGA, GF14 OMEGA | GRF2 (GENERAL REGULATORY FACTOR 2); protein binding / protein phosphorylated amino acid binding
Coordinates
chrA07:+:21846746..21848602
Molecular Weight (calculated)
29256.3 Da
IEP (calculated)
4.367
GRAVY (calculated)
-0.499
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSAREEYV YMAKLAEQAE RYEEMVEFME KVSAAIDGDE LTVEERNLLS VAYKNVIGAR RASWRIISSI EQKEESRGND DHVKAIRDYR AKIETELSGI
101: CDGILKLLDD RLVPAAGSGD SKVFYLKMKG DYHRYLAEFK TGQERKDAAE NTLSAYKAAQ DIANAELAPT HPIRLGLALN FSVFYYEILN SPDRACSLAK
201: QAFDEAIAEL DTLGEESYKD STLIMQLLRD NLTLWTSDMQ DDDAGEEIKE ASAPKPTEEQ
101: CDGILKLLDD RLVPAAGSGD SKVFYLKMKG DYHRYLAEFK TGQERKDAAE NTLSAYKAAQ DIANAELAPT HPIRLGLALN FSVFYYEILN SPDRACSLAK
201: QAFDEAIAEL DTLGEESYKD STLIMQLLRD NLTLWTSDMQ DDDAGEEIKE ASAPKPTEEQ
001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
Arabidopsis Description
GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.