Factsheet for Bra021188.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34965	Canola	cytosol	88.93	94.04
Bra007287.1-P	Field mustard	cytosol	71.23	88.5
GSMUA_Achr8P10210_001	Banana	cytosol	15.69	82.11
AT3G16650.1	Thale cress	cytosol	76.06	78.91
Bra012753.1-P	Field mustard	cytosol	76.26	78.79
GSMUA_Achr8P10200_001	Banana	cytosol	13.88	77.53
KRH12069	Soybean	nucleus	71.43	74.58
KRH37088	Soybean	nucleus	71.23	74.21
VIT_05s0077g02310.t01	Wine grape	cytosol	71.03	72.93
Os03t0339100-01	Rice	nucleus	66.4	69.92
PGSC0003DMT400023040	Potato	mitochondrion	42.45	68.73
KXG25821	Sorghum	cytosol	65.19	67.64
TraesCS3B01G205300.1	Wheat	cytosol	64.99	67.43
TraesCS3D01G181100.1	Wheat	cytosol	64.99	67.43
TraesCS3A01G175600.2	Wheat	plastid	64.59	67.15
Zm00001d033309_P003	Maize	cytosol	64.79	66.67
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome, plastid	65.19	66.67
Solyc09g010620.1.1	Tomato	cytosol	20.52	62.58
HORVU3Hr1G035450.7	Barley	mitochondrion	61.57	59.77
GSMUA_Achr8P10190_001	Banana	cytosol, plastid	29.98	53.99
Bra024323.1-P	Field mustard	cytosol	13.48	22.56
Bra018529.1-P	Field mustard	cytosol	13.88	21.17
Bra019610.1-P	Field mustard	plastid	12.88	20.19
Bra003111.1-P	Field mustard	nucleus	9.05	19.4
Bra003387.1-P	Field mustard	cytosol	12.47	18.45
Bra016111.1-P	Field mustard	cytosol	13.08	16.29
Bra022611.1-P	Field mustard	cytosol	14.89	15.55
Bra004783.1-P	Field mustard	cytosol, golgi	12.88	15.42
Bra009201.1-P	Field mustard	nucleus	14.89	15.42
Bra003910.1-P	Field mustard	cytosol	10.66	14.02
Bra037932.1-P	Field mustard	mitochondrion	13.08	11.3
Bra023416.1-P	Field mustard	nucleus	14.49	11.13
Bra006202.1-P	Field mustard	nucleus	14.49	10.88
Bra005990.1-P	Field mustard	cytosol	13.48	7.9
Bra009683.1-P	Field mustard	cytosol	13.28	7.28
Bra031445.1-P	Field mustard	cytosol	15.29	6.77

Protein Annotations

MapMan:16.4.5.1.3	Gene3D:2.130.10.10	EnsemblPlantsGene:Bra021188	EnsemblPlants:Bra021188.1	EnsemblPlants:Bra021188.1-P	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M4DXE2	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR19923	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00025439EC	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

AT4G15900 (E=8e-197) PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS 1); basal transcription repressor/ nucleotide binding / protein binding

Coordinates

chrA01:-:23454353..23457655

Molecular Weight (calculated)

55399.7 Da

IEP (calculated)

9.808

GRAVY (calculated)

-0.466

Length

497 amino acids

Sequence
(BLAST)

001: MTTEIEPQSL QKLSHKSVKR ALDLFSPARD QLAPPDPESK KVRLSHKIQV AFGGVEPVSK QHIRKAEHNN EQIAPSNALP GEKVSTFLVV YCSKVSNFYC
101: LMNSSRSRRS QGSSKGLAVV GPTLPPRSLN DNTVHAGKST TVLPAFGSSS ERNLSTSALM ERIPSRWPRP EWHAPWKYYR VIQGGHLGWV RSVAFDSSND
201: WFCTGSADRT IKVWDVASGV LKHTLTGHIG QVRGLAVSNQ HSYIFSAGDD KQVKCWDLEQ NKVIRSYHGH LSGVYCLALQ PTLDVVLTGG RDSVCRVWDI
301: RTKVQTFALS GHDKDVCSVF TRPTDPQVVT GSHDSTIKFW DLRYGRTMAT LTNHKKAVRA MVLHPKENAF VSASVDNIKK FSLPKGEFRH NMLSQQRATI
401: NAVAVNEDGV MVTGGDNGSL WFWDWKSGHS FQQAKTIVQP GSLESEAGIY AACYDQTGSR LVTCEADKTI KMWKEDENAT PETHPLNFRP PKEIRRF

Best Arabidopsis Sequence Match ( AT3G16650.1 )
(BLAST)

001: MTMIALNREV ETQSLKKLSL KSVRRAREIF SPVHGQFPQP DPESKRIRLC HKIQVAFGGV EPASKPTRIA DHNSEKTAPL KALALPGPKG SKELRKSATE
101: KALVVGPTLP PRDLNNTGNP GKSTAILPAP GSFSERNLST AALMERMPSR WPRPEWHAPW KNYRVLQGHL GWVRSVAFDP SNEWFCTGSA DRTIKIWDVA
201: TGVLKLTLTG HIGQVRGLAV SNRHTYMFSA GDDKQVKCWD LEQNKVIRSY HGHLHGVYCL ALHPTLDVVL TGGRDSVCRV WDIRTKMQIF VLPHDSDVFS
301: VLARPTDPQV ITGSHDSTIK FWDLRYGKSM ATITNHKKTV RAMALHPKEN DFVSASADNI KKFSLPKGEF CHNMLSLQRD IINAVAVNED GVMVTGGDKG
401: GLWFWDWKSG HNFQRAETIV QPGSLESEAG IYAACYDQTG SRLVTCEGDK TIKMWKEDED ATPETHPLNF KPPKEIRRF

Arabidopsis Description

PRL2Protein pleiotropic regulator PRL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39190]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.