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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G350500.1
TraesCS1B01G364800.1
TraesCS1B01G473400.1
TraesCS1D01G353300.1
TraesCS1D01G445700.1
TraesCS3A01G150300.2
TraesCS3A01G172000.1
TraesCS3A01G210100.2
TraesCS3A01G282800.1
TraesCS3B01G177300.1
TraesCS3B01G202800.2
TraesCS3B01G240600.1
TraesCS3B01G316500.1
TraesCS3D01G158200.1
TraesCS3D01G178500.1
TraesCS3D01G282800.1
TraesCS5A01G307100.1
TraesCS5A01G425300.1
TraesCS5A01G450800.1
TraesCS5B01G307500.2
TraesCS5B01G427400.1
TraesCS5B01G459200.1
TraesCS5D01G314000.1
TraesCS5D01G433700.3
TraesCS5D01G460800.1
TraesCSU01G002300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15900.1 TraesCS5A01G307100.1 AT1G09770.1 17575050
AT4G15900.1 TraesCS5A01G450800.1 AT1G09770.1 17575050
AT4G15900.1 TraesCS5B01G307500.2 AT1G09770.1 17575050
AT4G15900.1 TraesCS5B01G459200.1 AT1G09770.1 17575050
AT4G15900.1 TraesCS5D01G314000.1 AT1G09770.1 17575050
AT4G15900.1 TraesCS5D01G460800.1 AT1G09770.1 17575050
AT4G15900.1 TraesCS1A01G350500.1 AT3G29160.1 10220464
AT4G15900.1 TraesCS1B01G364800.1 AT3G29160.1 10220464
AT4G15900.1 TraesCS1D01G353300.1 AT3G29160.1 10220464
AT4G15900.1 TraesCS3A01G282800.1 AT3G29160.1 10220464
AT4G15900.1 TraesCS3B01G316500.1 AT3G29160.1 10220464
AT4G15900.1 TraesCS3D01G282800.1 AT3G29160.1 10220464
AT4G15900.1 TraesCS3A01G172000.1 AT4G02150.1 9765207
AT4G15900.1 TraesCS3B01G202800.2 AT4G02150.1 9765207
AT4G15900.1 TraesCS3D01G178500.1 AT4G02150.1 9765207
AT4G15900.1 TraesCS1B01G473400.1 AT4G05420.1 18223036
AT4G15900.1 TraesCS1D01G445700.1 AT4G05420.1 18223036
AT4G15900.1 TraesCS3A01G210100.2 AT4G05420.1 18223036
AT4G15900.1 TraesCS3B01G240600.1 AT4G05420.1 18223036
AT4G15900.1 TraesCSU01G002300.1 AT4G05420.1 18223036
AT4G15900.1 TraesCS5A01G425300.1 AT5G46210.1 18223036
AT4G15900.1 TraesCS5B01G427400.1 AT5G46210.1 18223036
AT4G15900.1 TraesCS5D01G433700.3 AT5G46210.1 18223036
AT4G15900.1 TraesCS3A01G150300.2 AT5G58720.1 10220464
AT4G15900.1 TraesCS3B01G177300.1 AT5G58720.1 10220464
AT4G15900.1 TraesCS3D01G158200.1 AT5G58720.1 10220464
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G181100.1 Wheat cytosol 99.16 99.16
TraesCS3A01G175600.2 Wheat plastid 97.91 98.12
GSMUA_Achr8P10210_001 Banana cytosol 17.95 90.53
Os03t0339100-01 Rice nucleus 89.14 90.47
KXG25821 Sorghum cytosol 89.98 89.98
GSMUA_Achr8P10200_001 Banana cytosol 16.7 89.89
Zm00001d033309_P003 Maize cytosol 88.94 88.2
HORVU3Hr1G035450.7 Barley mitochondrion 91.02 85.16
GSMUA_Achr11P... Banana cytosol, nucleus, peroxisome, plastid 79.75 78.6
CDY27174 Canola cytosol 24.63 77.12
KRH12069 Soybean nucleus 75.99 76.47
KRH37088 Soybean nucleus 75.37 75.68
VIT_05s0077g02310.t01 Wine grape cytosol 76.2 75.41
Bra012753.1-P Field mustard cytosol 74.32 74.01
AT4G15900.1 Thale cress cytosol 73.7 72.63
PGSC0003DMT400023040 Potato mitochondrion 46.14 71.99
Bra007287.1-P Field mustard cytosol 58.46 70.0
AT3G16650.1 Thale cress cytosol 68.48 68.48
CDY44171 Canola cytosol 21.92 67.74
Bra021188.1-P Field mustard cytosol 67.43 64.99
Solyc09g010620.1.1 Tomato cytosol 21.5 63.19
GSMUA_Achr8P10190_001 Banana cytosol, plastid 35.28 61.23
TraesCS6B01G275200.2 Wheat cytosol 14.61 23.33
TraesCS4B01G056500.1 Wheat cytosol 15.66 23.22
TraesCS2B01G224500.1 Wheat plastid 15.03 21.69
TraesCS1B01G374800.1 Wheat cytosol 15.24 18.53
TraesCS7B01G406900.1 Wheat cytosol, plastid 13.36 18.5
TraesCS1B01G478100.1 Wheat cytosol 17.95 18.07
TraesCS2B01G148600.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 15.87 15.67
TraesCS5B01G292800.1 Wheat nucleus 14.61 9.82
TraesCS3B01G349000.2 Wheat cytosol 16.08 9.27
TraesCS1B01G181100.1 Wheat cytosol 15.45 8.98
TraesCS2B01G591600.2 Wheat cytosol 15.45 8.07
Protein Annotations
MapMan:16.4.5.1.3Gene3D:2.130.10.10InterPro:G-protein_beta_WD-40_repGO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986PFAM:PF00400PRINTS:PR00320ScanProsite:PS00678
PFscan:PS50082PFscan:PS50294PANTHER:PTHR19923SMART:SM00320SUPFAM:SSF50978EnsemblPlantsGene:TraesCS3B01G205300
EnsemblPlants:TraesCS3B01G205300.1InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf
TIGR:cd00200SEG:seg::::
Description
No Description!
Coordinates
chr3B:+:239902450..239908078
Molecular Weight (calculated)
52618.7 Da
IEP (calculated)
9.332
GRAVY (calculated)
-0.361
Length
479 amino acids
Sequence
(BLAST)
001: MAMAAAAAGG EPVEPQSLKK LSLKSLKRSL DLFAPTHSLP FAPDAESKRI RVSCKVNAEY GSVKNLPTEQ GRAQVKGAAA PSNALALLGT QDTKDAPREG
101: TSNAIIPSPL MLPKAPESAV PGKNTTVLSI PGSSDRFSTS ALMERLPSRW PKPVWHAPWK NYRVISGHLG WVRSIAFDPG NEWFCTGSAD RTIKIWDLAS
201: GTLKLTLTGH IEQVRGLAVS QRHTYLFSAG DDKQVKCWDL EQNKVIRSYH GHLSGVYCLA LHPTIDVLLT GGRDSVCRVW DIRTKAHVSA LTGHDNTVCS
301: VFARPTDPQV VTGSHDTTIK FWDLVAGKTM CTLTHHKKSV RAMALHPKEK SFASASADNI KKWSLPKGEF LHNMLSQQKT ILNAMAVNED GVLATAGDNG
401: SMWFWDWKSG HNFQQEQTIV QPGSLESEAC IYALSYDNSG SRLVTCEADK TIKMWKEDLT ATPETHPVNF KPPKDIRRY
Best Arabidopsis Sequence Match ( AT4G15900.1 )
(BLAST)
001: MPAPTTEIEP IEAQSLKKLS LKSLKRSLEL FSPVHGQFPP PDPEAKQIRL SHKMKVAFGG VEPVVSQPPR QPDRINEQPG PSNALSLAAP EGSKSTQKGA
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF
Arabidopsis Description
PRL1Protein pleiotropic regulatory locus 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42384]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.