Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G126700.2 | Wheat | cytoskeleton, cytosol, nucleus | 80.21 | 97.98 |
| TraesCS2D01G129200.1 | Wheat | cytoskeleton, cytosol, nucleus | 80.0 | 97.98 |
| TraesCS1B01G374800.1 | Wheat | cytosol | 68.45 | 84.26 |
| HORVU2Hr1G022250.4 | Barley | mitochondrion | 83.09 | 81.25 |
| Os03t0685600-01 | Rice | cytosol | 65.15 | 80.2 |
| KXG26924 | Sorghum | cytoskeleton, cytosol, nucleus | 63.3 | 77.14 |
| Zm00001d041945_P003 | Maize | cytosol | 62.06 | 70.82 |
| GSMUA_Achr11P... | Banana | cytosol | 42.89 | 60.29 |
| Zm00001d011779_P005 | Maize | cytosol | 60.82 | 60.2 |
| Solyc07g008860.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 47.84 | 58.44 |
| PGSC0003DMT400073944 | Potato | cytoskeleton, cytosol, nucleus | 47.63 | 58.19 |
| VIT_18s0164g00020.t01 | Wine grape | nucleus | 46.6 | 57.8 |
| VIT_11s0016g02220.t01 | Wine grape | cytosol | 45.98 | 56.74 |
| KRG91764 | Soybean | cytoskeleton, cytosol, nucleus | 42.89 | 53.2 |
| AT1G71840.1 | Thale cress | nucleus | 42.06 | 50.12 |
| CDX68298 | Canola | cytosol | 40.0 | 49.87 |
| CDX72834 | Canola | cytosol | 40.62 | 49.5 |
| CDY36678 | Canola | cytosol | 39.59 | 49.36 |
| CDX96351 | Canola | cytosol | 40.21 | 48.87 |
| Bra003910.1-P | Field mustard | cytosol | 37.94 | 48.68 |
| Bra016111.1-P | Field mustard | cytosol | 40.0 | 48.62 |
| KRH37298 | Soybean | cytosol | 37.94 | 48.55 |
| KRH35009 | Soybean | cytosol | 13.4 | 47.1 |
| TraesCS4B01G056500.1 | Wheat | cytosol | 18.14 | 27.24 |
| TraesCS7B01G406900.1 | Wheat | cytosol, plastid | 16.91 | 23.7 |
| TraesCS2B01G224500.1 | Wheat | plastid | 15.46 | 22.59 |
| TraesCS6B01G275200.2 | Wheat | cytosol | 12.37 | 20.0 |
| TraesCS1B01G478100.1 | Wheat | cytosol | 18.35 | 18.7 |
| TraesCS3B01G205300.1 | Wheat | cytosol | 15.67 | 15.87 |
| TraesCS5B01G292800.1 | Wheat | nucleus | 14.64 | 9.96 |
| TraesCS3B01G349000.2 | Wheat | cytosol | 15.67 | 9.15 |
| TraesCS1B01G181100.1 | Wheat | cytosol | 14.64 | 8.62 |
| TraesCS2B01G591600.2 | Wheat | cytosol | 15.46 | 8.18 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19857 | PANTHER:PTHR19857:SF8 | SMART:SM00320 | SUPFAM:SSF50978 |
| EnsemblPlantsGene:TraesCS2B01G148600 | EnsemblPlants:TraesCS2B01G148600.2 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | TIGR:cd00200 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:-:114650157..114653879
Molecular Weight (calculated)
52556.0 Da
IEP (calculated)
4.254
GRAVY (calculated)
-0.153
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLLMSGMLF MHMNRFMSSY VLVYVSEMLN SMHLFTRMFA SVYTAQPNTL LILNASAPQR STVGSEDPPL FSPATLAAAK TPAAPPAAMS ISGEVPDEGS
101: DGEEVFIDEQ DIIQEIHLDE EDLPDHDDDD DDDEEDQEMD EVEDHSAYAF HGHTDEVFAA ACSPIDASLV VSGGKDDRGF LWRIGSAQEF QELTGHGDTV
201: CTVAFSSDGK LVACGSMDGQ INVWNTATRT LQGTLEGSSG SGFEWLRWHP RGNLIIAGSE DCNVWMWNAE HNAFLNTFAG HSSTVTCGDF TPDGKLICSG
301: SDDATLRIWD PRSAQCRHVV RGHGYHTQGL TCLAITPDSQ SIVSGSEDNS VHIVSINSGQ VVGSLVGHTN SIECIGISSR YNWVATGSID RTLIIWDLAR
401: QAIRSTCEHD EGVTCLAWLG SSRYVASGCI DGMVRIWDSL SGDLARTFSG HRDVVQSLAV SADGNSIVSV STDKSARVFD ISMFK
101: DGEEVFIDEQ DIIQEIHLDE EDLPDHDDDD DDDEEDQEMD EVEDHSAYAF HGHTDEVFAA ACSPIDASLV VSGGKDDRGF LWRIGSAQEF QELTGHGDTV
201: CTVAFSSDGK LVACGSMDGQ INVWNTATRT LQGTLEGSSG SGFEWLRWHP RGNLIIAGSE DCNVWMWNAE HNAFLNTFAG HSSTVTCGDF TPDGKLICSG
301: SDDATLRIWD PRSAQCRHVV RGHGYHTQGL TCLAITPDSQ SIVSGSEDNS VHIVSINSGQ VVGSLVGHTN SIECIGISSR YNWVATGSID RTLIIWDLAR
401: QAIRSTCEHD EGVTCLAWLG SSRYVASGCI DGMVRIWDSL SGDLARTFSG HRDVVQSLAV SADGNSIVSV STDKSARVFD ISMFK
001: MSNNTNNTEM NNLAMEEEDE GEIFLGESDV LREIDVDEED LPEADDDDMD DDGEQFDEND DSVHTFTGHK GELYALACSP TDATLVATGG GDDKAFLWKI
101: GNGDWAAELP GHKDSVSCLA FSYDGQLLAS GGLDGVVQIF DASSGTLKCV LDGPGAGIEW VRWHPRGHIV LAGSEDCSLW MWNADKEAYL NMFSGHNLNV
201: TCGDFTPDGK LICTGSDDAS LIVWNPKTCE SIHIVKGHPY HTEGLTCLDI NSNSSLAISG SKDGSVHIVN IVTGKVVSSL NSHTDSVECV KFSPSSATIP
301: LAATGGMDKK LIIWDLQHST PRFICEHEEG VTSLTWIGTS KYLATGCANG TVSIWDSLLG NCVHTYHGHQ DAVQAISVST NTDFIVSVSV DNTARVFESS
401: EFQNKVT
101: GNGDWAAELP GHKDSVSCLA FSYDGQLLAS GGLDGVVQIF DASSGTLKCV LDGPGAGIEW VRWHPRGHIV LAGSEDCSLW MWNADKEAYL NMFSGHNLNV
201: TCGDFTPDGK LICTGSDDAS LIVWNPKTCE SIHIVKGHPY HTEGLTCLDI NSNSSLAISG SKDGSVHIVN IVTGKVVSSL NSHTDSVECV KFSPSSATIP
301: LAATGGMDKK LIIWDLQHST PRFICEHEEG VTSLTWIGTS KYLATGCANG TVSIWDSLLG NCVHTYHGHQ DAVQAISVST NTDFIVSVSV DNTARVFESS
401: EFQNKVT
Arabidopsis Description
Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.