Factsheet for TraesCS2B01G224500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G196900.1	Wheat	plastid	97.89	98.19
TraesCS2D01G204900.1	Wheat	cytosol, plastid	98.19	90.3
HORVU2Hr1G041020.2	Barley	cytosol, plastid	96.99	89.44
KXG36525	Sorghum	plastid	85.54	86.32
Zm00001d021868_P001	Maize	plastid	84.64	85.67
Os07t0572000-01	Rice	plastid	87.05	85.5
Zm00001d021866_P001	Maize	plastid	84.34	85.37
GSMUA_Achr7P01850_001	Banana	plastid	48.19	68.38
Solyc09g065290.2.1	Tomato	cytosol, plastid	62.95	66.35
VIT_07s0151g00960.t01	Wine grape	cytosol	62.35	65.71
PGSC0003DMT400049837	Potato	cytosol, plastid	62.05	65.4
CDX91316	Canola	cytosol	60.24	61.35
Bra018529.1-P	Field mustard	cytosol	59.94	61.04
CDX97287	Canola	cytosol	59.94	61.04
AT4G02730.1	Thale cress	cytosol	60.84	60.66
KRH71413	Soybean	nucleus	58.13	60.31
KRH32024	Soybean	cytosol	57.83	60.19
TraesCS4B01G056500.1	Wheat	cytosol	56.63	58.2
CDX70436	Canola	plastid	25.0	49.7
TraesCS6B01G275200.2	Wheat	cytosol	25.6	28.33
TraesCS7B01G406900.1	Wheat	cytosol, plastid	25.6	24.57
TraesCS1B01G478100.1	Wheat	cytosol	29.82	20.8
TraesCS1B01G374800.1	Wheat	cytosol	22.89	19.29
TraesCS2B01G148600.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	22.59	15.46
TraesCS3B01G205300.1	Wheat	cytosol	21.69	15.03
TraesCS5B01G292800.1	Wheat	nucleus	25.0	11.64
TraesCS1B01G181100.1	Wheat	cytosol	21.99	8.86
TraesCS3B01G349000.2	Wheat	cytosol	21.39	8.54
TraesCS2B01G591600.2	Wheat	cytosol	21.69	7.85

Protein Annotations

MapMan:12.3.3.2.3	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22847	PANTHER:PTHR22847:SF602	SMART:SM00320	SUPFAM:SSF50978
EnsemblPlantsGene:TraesCS2B01G224500	EnsemblPlants:TraesCS2B01G224500.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	TIGR:cd00200	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:214375786..214379003

Molecular Weight (calculated)

35910.4 Da

IEP (calculated)

8.252

GRAVY (calculated)

-0.192

Length

332 amino acids

Sequence
(BLAST)

001: MSSATQQQPP PAAPPYRPYR QVRAATPHTR AISCVRFSPC GRLLATASLD GTVALLSPSS LAVIANLRGH TQGVSDLSWS TDSNYLCSAS DDRTLRIWDI
101: RSILSGPKPA DPNADRCIRV LKGHTNFVFS ANFNPQTSSQ VASGGFDCTV RIWDVSSGRC IRTIDAHSEP VTSVHFIRDG SIIVSGSHDG SCKIWDAGTG
201: SCLKTVIDDD KKPAVSCSMF SPNGKFILVA TLDDSLKLCN YATGKFLKVY SGHVNRAYCI QSAFSVTNGK YIVSGSEDKC IYIWDLQGKN ILQKMEGHTD
301: AVISVSCHPT ENKIASGSLD NDKTVRLWVQ DG

Best Arabidopsis Sequence Match ( AT4G02730.1 )
(BLAST)

001: MPSGGNGTSN GVANANSTGN AGTSGNVPIY KPYRHLKTLE GHTAAISCVK FSNDGNLLAS ASVDKTMILW SATNYSLIHR YEGHSSGISD LAWSSDSHYT
101: CSASDDCTLR IWDARSPYEC LKVLRGHTNF VFCVNFNPPS NLIVSGSFDE TIRIWEVKTG KCVRMIKAHS MPISSVHFNR DGSLIVSASH DGSCKIWDAK
201: EGTCLKTLID DKSPAVSFAK FSPNGKFILV ATLDSTLKLS NYATGKFLKV YTGHTNKVFC ITSAFSVTNG KYIVSGSEDN CVYLWDLQAR NILQRLEGHT
301: DAVISVSCHP VQNEISSSGN HLDKTIRIWK QDA

Arabidopsis Description

WDR5BCOMPASS-like H3K4 histone methylase component WDR5B [Source:UniProtKB/Swiss-Prot;Acc:Q9SY00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.