Factsheet for Os07t0572000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36525	Sorghum	plastid	86.69	89.06
Zm00001d021866_P001	Maize	plastid	85.5	88.11
Zm00001d021868_P001	Maize	plastid	85.21	87.8
TraesCS2A01G196900.1	Wheat	plastid	85.8	87.61
TraesCS2B01G224500.1	Wheat	plastid	85.5	87.05
TraesCS2D01G204900.1	Wheat	cytosol, plastid	85.21	79.78
HORVU2Hr1G041020.2	Barley	cytosol, plastid	84.32	79.17
GSMUA_Achr7P01850_001	Banana	plastid	47.04	67.95
Solyc09g065290.2.1	Tomato	cytosol, plastid	60.95	65.4
PGSC0003DMT400049837	Potato	cytosol, plastid	60.95	65.4
VIT_07s0151g00960.t01	Wine grape	cytosol	59.47	63.81
KRH32024	Soybean	cytosol	57.99	61.44
KRH71413	Soybean	nucleus	57.99	61.25
Bra018529.1-P	Field mustard	cytosol	57.99	60.12
CDX97287	Canola	cytosol	57.99	60.12
CDX91316	Canola	cytosol	57.69	59.82
Os03t0725400-02	Rice	cytosol	56.51	58.95
AT4G02730.1	Thale cress	cytosol	57.69	58.56
CDX70436	Canola	plastid	23.67	47.9
Os02t0543400-01	Rice	cytosol, mitochondrion	25.44	28.57
Os06t0653800-01	Rice	nucleus	26.33	25.95
Os11t0594200-01	Rice	cytosol	30.47	21.46
Os10t0104500-01	Rice	cytosol	30.47	21.46
Os03t0685600-01	Rice	cytosol	19.53	16.75
Os03t0339100-01	Rice	nucleus	21.01	15.04
Os03t0746600-01	Rice	nucleus	21.89	14.48
Os10t0494800-01	Rice	cytosol	22.78	8.8
Os01t0780400-02	Rice	cytosol	20.71	8.35
Os04t0677700-00	Rice	cytosol	18.64	7.08
Os01t0531300-00	Rice	endoplasmic reticulum, extracellular	1.18	1.8
Os01t0951000-02	Rice	cytosol, mitochondrion, nucleus	0.89	1.06

Protein Annotations

MapMan:12.3.3.2.3	Gene3D:2.130.10.10	EntrezGene:4343672	ProteinID:BAC84670.1	ProteinID:BAF21969.1	ProteinID:BAT02243.1
ProteinID:EAZ40368.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os07g0572000	EnsemblPlants:Os07t0572000-01	PFAM:PF00400	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22847	PANTHER:PTHR22847:SF602	UniProt:Q6YTU7
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00001BF78A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_015644911.1	SEG:seg	:	:

Description

OsWD40-144WD40/YVTN repeat-like domain containing protein. (Os07t0572000-01)

Coordinates

chr7:+:23091890..23094419

Molecular Weight (calculated)

36249.8 Da

IEP (calculated)

8.301

GRAVY (calculated)

-0.162

Length

338 amino acids

Sequence
(BLAST)

001: MSQQQQAPAP PYRPYRQVRA ATPHSRAVSC VRFSPCGRLL ATASLDGTVA LLSPSSLAAI ATLRGHADGV SDISWSTDSF YLCSASDDRT LRIWDVRPVL
101: AGLNPGSGGG GGGAQPADPN ADRCIRVLKG HTNFVFSANF NPQTNSTVAS GGFDCTVRIW DVKSGRCVRA IDAHSEPVTS VHFIRDGSII VSGSHDGTCK
201: IWDAGTGSCL KTVIDEKKPA VSFSMFSPNG KFILVAALDD TLKLCNFASG KFLKMYSGHV NRKYCLQSAF SVTNGKYIVS GSEDNCVYIW DLQGKNILQK
301: LEGHTDTVIS VSCHPTENKI ASGGLDNDRT VRLWLQDG

Best Arabidopsis Sequence Match ( AT4G02730.1 )
(BLAST)

001: MPSGGNGTSN GVANANSTGN AGTSGNVPIY KPYRHLKTLE GHTAAISCVK FSNDGNLLAS ASVDKTMILW SATNYSLIHR YEGHSSGISD LAWSSDSHYT
101: CSASDDCTLR IWDARSPYEC LKVLRGHTNF VFCVNFNPPS NLIVSGSFDE TIRIWEVKTG KCVRMIKAHS MPISSVHFNR DGSLIVSASH DGSCKIWDAK
201: EGTCLKTLID DKSPAVSFAK FSPNGKFILV ATLDSTLKLS NYATGKFLKV YTGHTNKVFC ITSAFSVTNG KYIVSGSEDN CVYLWDLQAR NILQRLEGHT
301: DAVISVSCHP VQNEISSSGN HLDKTIRIWK QDA

Arabidopsis Description

WDR5BCOMPASS-like H3K4 histone methylase component WDR5B [Source:UniProtKB/Swiss-Prot;Acc:Q9SY00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.