Factsheet for Os10t0104500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0594200-01	Rice	cytosol	95.21	95.21
TraesCS1A01G443600.1	Wheat	cytosol	90.83	91.79
TraesCS1B01G478100.1	Wheat	cytosol	90.42	91.18
TraesCS1D01G451700.1	Wheat	cytosol	90.0	90.95
EES18812	Sorghum	cytosol	90.42	90.61
Zm00001d039211_P006	Maize	cytosol	90.83	87.73
HORVU1Hr1G095080.1	Barley	cytosol, plastid	90.0	85.88
Bra009201.1-P	Field mustard	nucleus	63.12	63.12
CDX98931	Canola	nucleus	62.5	62.5
CDX70097	Canola	cytosol	59.79	62.12
CDY08014	Canola	mitochondrion	10.21	48.04
CDX77842	Canola	cytosol, nucleus, peroxisome	9.17	44.44
Os03t0725400-02	Rice	cytosol	22.29	33.02
Os07t0572000-01	Rice	plastid	21.46	30.47
Os06t0653800-01	Rice	nucleus	17.5	24.49
Os03t0685600-01	Rice	cytosol	19.17	23.35
Os02t0543400-01	Rice	cytosol, mitochondrion	14.58	23.26
Os03t0339100-01	Rice	nucleus	18.12	18.43
Os03t0746600-01	Rice	nucleus	15.0	14.09
Os01t0780400-02	Rice	cytosol	17.29	9.9
Os10t0494800-01	Rice	cytosol	16.67	9.14
Os04t0677700-00	Rice	cytosol	15.42	8.31
Os01t0531300-00	Rice	endoplasmic reticulum, extracellular	0.62	1.35
Os01t0951000-02	Rice	cytosol, mitochondrion, nucleus	0.42	0.71

Protein Annotations

MapMan:17.1.2.2.1.12	Gene3D:2.130.10.10	EntrezGene:4347950	ProteinID:ABB46582.1	ProteinID:BAF25934.1	ProteinID:BAT09585.1
ProteinID:BAT09586.1	ProteinID:EEE50449.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000027	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
GO:GO:0005737	GO:GO:0005840	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0042254
InterPro:Gprotein_B	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:NLE	EnsemblPlantsGene:Os10g0104500
EnsemblPlants:Os10t0104500-01	PFAM:PF00400	PFAM:PF08154	PRINTS:PR00319	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19848	UniProt:Q33BI7	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI00005E1AFE	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
RefSeq:XP_015612996.1	SEG:seg	:	:	:	:

Description

OsWD40-175Similar to Notchless-related. (Os10t0104500-01);Hypothetical conserved gene. (Os10t0104500-02)

Coordinates

chr10:-:348798..357989

Molecular Weight (calculated)

53252.1 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.392

Length

480 amino acids

Sequence
(BLAST)

001: MESPNQNQQQ ESSSGSSVMC QLVSPEGDHL GAALYLPHNV GPPQLQEIVN HLLHNEDKLP YAFYIGDEEL SVQLGAYMQQ KNANVEVTLR IVYQPQAIFR
101: IRPVNRCSAT IAGHTEAVLA VSFSPDGRCL ASGSGDTTVR FWDLSTQTPL FTCKGHKNWV LCIAWSPDGN HLVSGSKSGE LILWDPKTGK QLGTPLTGHR
201: KWITAVSWEP VHLQSPCRRF VSTSKDGDAR IWDMTTRKCV IALTGHTNSV TCVKWGGDGL IYTGSEDCSI KVWETSQGKL VKTLQGHGHW VNSLALSTEY
301: VLRTGAYDHT GKTYSTAEEM KEAALARYKK MRGNAPERLV SGSDDFTMFL WEPTISKQPK ARMTGHQKLV NHVYFSPDGQ WLASASFDKS VKLWNGITGK
401: FVAAFRGHVA DVYQISWSAD SRLLLSGSKD STLKVWDIRT RKLKQDLPGH ADEVYAVDWS PDGEKVASGG KDRVLKLWMN

Best Arabidopsis Sequence Match ( AT5G52820.1 )
(BLAST)

001: MTMMDTDEGK TVMCLLTDPE GTHLGSAMYI PQKAGPLQLT QLVNRFLDNE EMLPYSFYVS DEELLVPVGT YLEKNKVSVE KVLTIVYQQQ AVFRIRPVNR
101: CSQTIAGHAE AVLCVSFSPD GKQLASGSGD TTVRLWDLYT ETPLFTCKGH KNWVLTVAWS PDGKHLVSGS KSGEICCWNP KKGELEGSPL TGHKKWITGI
201: SWEPVHLSSP CRRFVTSSKD GDARIWDITL KKSIICLSGH TLAVTCVKWG GDGIIYTGSQ DCTIKMWETT QGKLIRELKG HGHWINSLAL STEYVLRTGA
301: FDHTGRQYPP NEEKQKALER YNKTKGDSPE RLVSGSDDFT MFLWEPSVSK QPKKRLTGHQ QLVNHVYFSP DGKWIASASF DKSVRLWNGI TGQFVTVFRG
401: HVGPVYQVSW SADSRLLLSG SKDSTLKIWE IRTKKLKQDL PGHADEVFAV DWSPDGEKVV SGGKDRVLKL WKG

Arabidopsis Description

NLE1NLE [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.