Factsheet for HORVU1Hr1G095080.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G478100.1	Wheat	cytosol	91.25	96.43
TraesCS1A01G443600.1	Wheat	cytosol	91.05	96.42
TraesCS1D01G451700.1	Wheat	cytosol	90.85	96.21
Os10t0104500-01	Rice	cytosol	85.88	90.0
Os11t0594200-01	Rice	cytosol	85.69	89.79
EES18812	Sorghum	cytosol	82.7	86.85
Zm00001d039211_P006	Maize	cytosol	83.5	84.51
GSMUA_Achr3P29050_001	Banana	nucleus	75.75	79.71
Solyc03g112530.2.1	Tomato	nucleus	72.96	76.3
PGSC0003DMT400046634	Potato	cytosol	72.96	76.3
VIT_13s0064g00360.t01	Wine grape	nucleus	72.17	76.1
KRH70275	Soybean	nucleus	71.57	75.0
KRH08668	Soybean	nucleus	71.57	75.0
AT5G52820.1	Thale cress	cytosol	68.39	72.73
Bra009201.1-P	Field mustard	nucleus	61.43	64.38
CDX98931	Canola	nucleus	60.84	63.75
CDX70097	Canola	cytosol	58.25	63.42
VIT_13s0064g00330.t01	Wine grape	extracellular	14.12	54.2
CDY08014	Canola	mitochondrion	9.94	49.02
CDX77842	Canola	cytosol, nucleus, peroxisome	8.95	45.45
HORVU4Hr1G009500.1	Barley	cytosol, plastid	20.68	29.97
HORVU2Hr1G041020.2	Barley	cytosol, plastid	19.28	26.94
HORVU7Hr1G111780.2	Barley	cytosol, plastid	16.9	24.57
HORVU3Hr1G013230.4	Barley	cytosol	18.49	23.25
HORVU6Hr1G063000.1	Barley	cytosol	14.31	22.64
HORVU0Hr1G027010.1	Barley	plastid	14.31	20.06
HORVU2Hr1G022250.4	Barley	mitochondrion	18.09	18.35
HORVU3Hr1G035450.7	Barley	mitochondrion	17.1	16.8
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	16.3	15.92
HORVU5Hr1G075920.16	Barley	nucleus	16.7	11.43
HORVU5Hr1G077690.1	Barley	cytosol, mitochondrion, plastid, vacuole	16.3	10.89
HORVU1Hr1G061600.22	Barley	cytosol	15.31	9.48
HORVU3Hr1G076760.7	Barley	cytosol, mitochondrion, nucleus	16.5	8.6

Protein Annotations

MapMan:17.1.2.2.1.12	Gene3D:2.130.10.10	UniProt:A0A287GTW2	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
InterPro:Gprotein_B	EnsemblPlantsGene:HORVU1Hr1G095080	EnsemblPlants:HORVU1Hr1G095080.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
InterPro:NLE	PFAM:PF00400	PFAM:PF08154	PRINTS:PR00319	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19848	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B473B9C
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

No Description!

Coordinates

chrchr1H:+:557108008..557115788

Molecular Weight (calculated)

55228.7 Da

IEP (calculated)

8.537

GRAVY (calculated)

-0.304

Length

503 amino acids

Sequence
(BLAST)

001: LRAAAAASLP LPRFPPPPPP PPPPLLSVMD AAAGNGSSGS VMCQLVSAEG EHLGAALYLP HNVGPPQLQE IVNHLLRNED KLPYAFYVGD EELSLQLGAF
101: MQRNNANAEV TLRIVYQPQA VFRISPVNRC SATIAGHTEA VLTVSFSPDG TCLASGSGDT TVRFWDLNTQ TPLYTCKGHK NWVLCIAWSP DGKHLVSGSK
201: SGELILWDPK TGNQLGTPLT GHRKWITAVS WEPVHLQSPS RRFVSASKDG DARIWDITTK KCVISLTGHT NAVTCVKWGG DGLIYTGSED CLIKVWETTQ
301: GKLVKTLQGH GHWVNSLALS TEYVLRTGAY DHTRKTYSSP EEMKEAALAR YEKMRGNAPE RLVSGSDDFT MFLWEPTISK QPKARMTGHQ KVVNHVYFSP
401: DGQWLASASF DKSVKLWNGI TGKFVTAFRG HVADVYQISW SADSRLLLSG SKDSTLKVWD IRARKLKQDL PGHADEVYAV DWSPDGEKVV SGGKDRALKL
501: WMN

Best Arabidopsis Sequence Match ( AT5G52820.1 )
(BLAST)

001: MTMMDTDEGK TVMCLLTDPE GTHLGSAMYI PQKAGPLQLT QLVNRFLDNE EMLPYSFYVS DEELLVPVGT YLEKNKVSVE KVLTIVYQQQ AVFRIRPVNR
101: CSQTIAGHAE AVLCVSFSPD GKQLASGSGD TTVRLWDLYT ETPLFTCKGH KNWVLTVAWS PDGKHLVSGS KSGEICCWNP KKGELEGSPL TGHKKWITGI
201: SWEPVHLSSP CRRFVTSSKD GDARIWDITL KKSIICLSGH TLAVTCVKWG GDGIIYTGSQ DCTIKMWETT QGKLIRELKG HGHWINSLAL STEYVLRTGA
301: FDHTGRQYPP NEEKQKALER YNKTKGDSPE RLVSGSDDFT MFLWEPSVSK QPKKRLTGHQ QLVNHVYFSP DGKWIASASF DKSVRLWNGI TGQFVTVFRG
401: HVGPVYQVSW SADSRLLLSG SKDSTLKIWE IRTKKLKQDL PGHADEVFAV DWSPDGEKVV SGGKDRVLKL WKG

Arabidopsis Description

NLE1NLE [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.