Factsheet for HORVU0Hr1G027010.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G063000.1	Barley	cytosol	88.58	100.0
TraesCS6D01G232000.1	Wheat	cytosol	82.45	98.67
TraesCS6B01G275200.2	Wheat	cytosol	82.45	98.67
TraesCS6A01G250200.1	Wheat	cytosol	82.45	98.67
Os02t0543400-01	Rice	cytosol, mitochondrion	73.82	88.04
EES05216	Sorghum	cytosol	73.82	87.46
Zm00001d050708_P002	Maize	cytosol	72.98	86.47
GSMUA_Achr6P13100_001	Banana	cytosol	63.23	74.67
VIT_09s0002g01580.t01	Wine grape	cytosol	61.28	73.58
Solyc11g005550.1.1	Tomato	cytosol	59.89	71.91
KRH59511	Soybean	cytosol, nucleus	59.61	71.33
PGSC0003DMT400010145	Potato	cytosol	59.33	71.24
Bra024323.1-P	Field mustard	cytosol	58.77	71.04
CDY08856	Canola	cytosol	58.77	71.04
CDX84544	Canola	cytosol	59.05	70.67
AT5G64730.1	Thale cress	cytosol	58.5	70.23
KRH43376	Soybean	nucleus	60.17	67.29
HORVU4Hr1G009500.1	Barley	cytosol, plastid	24.23	25.07
HORVU2Hr1G041020.2	Barley	cytosol, plastid	23.68	23.61
HORVU7Hr1G111780.2	Barley	cytosol, plastid	19.78	20.52
HORVU3Hr1G013230.4	Barley	cytosol	16.71	15.0
HORVU1Hr1G095080.1	Barley	cytosol, plastid	20.06	14.31
HORVU3Hr1G035450.7	Barley	mitochondrion	18.94	13.28
HORVU2Hr1G022250.4	Barley	mitochondrion	16.99	12.3
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	16.99	11.84
HORVU5Hr1G075920.16	Barley	nucleus	17.55	8.57
HORVU5Hr1G077690.1	Barley	cytosol, mitochondrion, plastid, vacuole	17.27	8.23
HORVU1Hr1G061600.22	Barley	cytosol	14.21	6.28
HORVU3Hr1G076760.7	Barley	cytosol, mitochondrion, nucleus	15.6	5.8

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A287E9D3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:HORVU0Hr1G027010	EnsemblPlants:HORVU0Hr1G027010.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22847	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000B47547F	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:143301203..143305376

Molecular Weight (calculated)

39477.6 Da

IEP (calculated)

7.673

GRAVY (calculated)

-0.226

Length

359 amino acids

Sequence
(BLAST)

001: PASYALPCAV LTLQSPTPES SARSRAKEMS SAAQQLPRTE SRTLSGHEGA VLAVRFNHDG KYCLSCGKDR TLRLWNPHTG AHVKTYKSHG REVRDVNASS
101: DNAKLVSCGG DKQIFYWDVA SGKVIRKFRG HNSEVNSVKF NEHNTVVLSA GYDRSVRAFD CRSQSSDPIQ TIDTFQDSVM SVNVTNTEII AGSVDGTVRT
201: FDIRMGRETV DNLGHPVNCI SLSNDRNCIL ANCLDSTVRL LDKNSGEMLQ EYKGHICKVS PEQVVIALVT SILQKRNTVS LFSSVQFLQS FKMDCCLTND
301: DAFVVGGSED GFVFFWELVD APIVATFRAH SSVVTSVSYH PTKTCMLTSS VDGTIRVWT

Best Arabidopsis Sequence Match ( AT5G64730.1 )
(BLAST)

001: MSATELPTKE AHILKGHEGA VLAARFNGDG NYALTCGKDR TIRLWNPHRG ILIKTYKSHG REVRDVHVTS DNAKFCSCGG DRQVYYWDVS TGRVIRKFRG
101: HDGEVNAVKF NDSSSVVVSA GFDRSLRVWD CRSHSVEPVQ IIDTFLDTVM SVVLTKTEII GGSVDGTVRT FDMRIGREMS DNLGQPVNCI SISNDGNCVL
201: AGCLDSTLRL LDRTTGELLQ VYKGHISKSF KTDCCLTNSD AHVIGGSEDG LVFFWDLVDA KVLSKFRAHD LVVTSVSYHP KEDCMLTSSV DGTIRVWKK

Arabidopsis Description

Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.