Factsheet for HORVU5Hr1G077690.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, vacuole, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G292800.1	Wheat	nucleus	89.91	94.95
TraesCS5A01G293600.2	Wheat	nucleus	89.64	94.94
TraesCS5D01G300900.1	Wheat	nucleus	89.64	94.67
EES04226	Sorghum	nucleus	79.81	84.17
Zm00001d042091_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome, plastid	79.55	83.43
Os01t0951000-02	Rice	cytosol, mitochondrion, nucleus	31.08	82.69
GSMUA_Achr4P29380_001	Banana	nucleus	63.88	67.65
Bra006202.1-P	Field mustard	nucleus	56.84	64.65
KRH13395	Soybean	nucleus	61.09	64.43
Bra023416.1-P	Field mustard	nucleus	55.25	64.3
AT5G13480.2	Thale cress	nucleus	55.78	63.93
KRH20750	Soybean	nucleus	60.69	63.83
VIT_13s0019g00220.t01	Wine grape	nucleus	63.88	62.23
Solyc08g067040.2.1	Tomato	nucleus	60.96	60.08
CDY01533	Canola	plastid	11.16	53.16
HORVU2Hr1G041020.2	Barley	cytosol, plastid	11.16	23.33
HORVU4Hr1G009500.1	Barley	cytosol, plastid	9.56	20.75
HORVU6Hr1G063000.1	Barley	cytosol	8.23	19.5
HORVU7Hr1G111780.2	Barley	cytosol, plastid	8.63	18.79
HORVU3Hr1G013230.4	Barley	cytosol	9.96	18.75
HORVU0Hr1G027010.1	Barley	plastid	8.23	17.27
HORVU1Hr1G095080.1	Barley	cytosol, plastid	10.89	16.3
HORVU2Hr1G022250.4	Barley	mitochondrion	9.69	14.72
HORVU3Hr1G035450.7	Barley	mitochondrion	9.16	13.48
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	8.63	12.62
HORVU5Hr1G075920.16	Barley	nucleus	10.23	10.48
HORVU1Hr1G061600.22	Barley	cytosol	10.62	9.85
HORVU3Hr1G076760.7	Barley	cytosol, mitochondrion, nucleus	11.02	8.6

Protein Annotations

MapMan:16.2.1.2.7	Gene3D:2.130.10.10	UniProt:A0A287RVZ9	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007275	GO:GO:0008150
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009908	GO:GO:0009909	GO:GO:0080008
EnsemblPlantsGene:HORVU5Hr1G077690	EnsemblPlants:HORVU5Hr1G077690.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22836	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000B471AAA	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:553578811..553587324

Molecular Weight (calculated)

82736.9 Da

IEP (calculated)

9.345

GRAVY (calculated)

-0.722

Length

753 amino acids

Sequence
(BLAST)

001: LVPTKPSWLT VLTLPAAWTS HPKPGPFPAA RTPNPSPVAG QATAMMQQQQ QQPLPPPPPQ GPPPQPGGGG GDFYRGPLQP PMRQLSAASS TNLAPDYAGH
101: PGPQQHHQQP QQHQQQQQPP PFDAYGDNFG AKRMRKPVQR RTVDYTSSLV RYAQARMWQR DARDRFTLQP TAAAVLDMLP SVAYPDNPST SFAGKFVHSS
201: INKNRCSINC VVWTPTGRRL ITGSQSGEFT LWNGQSFNFE MILQAHEQAV RSMIWSHNEN WMVTGDDGGA IKYWQSNMNN VKVNKTAHRE SVRGLSFCRT
301: DLKFCSCSDD TTVKVWDFAR CQEERSLTGH GWDVKSVDWH PTKSLLASGG KDYLVKLWDA KSGRELRSFH GHKNIVQCVK WNQNGNWVLT ASKDQIIKLY
401: DIRSMKELES FRGHNKDVTA LAWHPFHEEY FVSGSYDGGI FHWLVGHEAP QIEINNAHDN SVWDLAWHPV GYLLSSGGND HATRFWCRNR PGDLTRDKFN
501: SGQIQGYGDQ HSAFAGRFQM PEQTPGPFAG TIPGIGVAMH LDGSDHGEQR PSIPGLPPGP PPLPPGPHPS LLPTGQQQHY QQMPQQQHSQ FRPPPPNMPP
601: PAHMLQHQQG PRSSLPQLSS MPGSMPGPSP VNPPLPPMPH PMAMQGSSNQ MMPQMPQHLI GLNQTHPGSI PPSNMPPMGG FPNGMGNIQG GSGASGMQNF
701: PMGGMYNRPQ GQMAPQGQMS SIPGLGSYQP GMGNVGLPPP PPQHPPPRGA APQ

Best Arabidopsis Sequence Match ( AT5G13480.1 )
(BLAST)

001: MYAGGDMHRG SQMPQPPMMR QSSASSTNIN PDYHHPSGPF DPNVDSFGAK RMRKHTQRRA VDYTSTVVRY IQARTWQRDS RDRTTLQPTP AAAVDMLPTV
101: AYSDNPSTSF AAKFVHASLN KNRCSINRVL WTPSGRRLIT GSQSGEFTLW NGQSFNFEMI LQAHDQPIRS MVWSHNENYM VSGDDGGTLK YWQNNMNNVK
201: ANKTAHKESI RDLSFCKTDL KFCSCSDDTT VKVWDFTKCV DESSLTGHGW DVKSVDWHPT KSLLVSGGKD QLVKLWDTRS GRELCSLHGH KNIVLSVKWN
301: QNGNWLLTAS KDQIIKLYDI RTMKELQSFR GHTKDVTSLA WHPCHEEYFV SGSSDGSICH WIVGHENPQI EIPNAHDNSV WDLAWHPIGY LLCSGSNDHT
401: TKFWCRNRPA DNPRDVLMQN QGYNEQGFGR QPDNFQPSEA SPIPGAFVPG LTRNEGTIPG IGIAMPFDAS SQGDHKQPLP GSMALGAPPL PPGPHPSLLG
501: SGQQQGYQQQ QQHQGHPQQM LPMPNMPHHQ LPPSSHMPLH PHHLPRPMQM PPHGHMPPPS MPMSHQMPGS MGMQGGMNPQ MSQSHFMGAP SGVFQGQPNS
601: GGPQMYPQGR GGFNRPQMIP GYNNPFQQQQ QPPLPPGPPP NNNQQHQ

Arabidopsis Description

FYTransducin/WD40 repeat-like superfamily protein [Source:TAIR;Acc:AT5G13480]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.