Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70506 | Canola | nucleus | 75.32 | 18.92 |
| CDX78524 | Canola | nucleus | 76.58 | 18.11 |
| CDX85646 | Canola | nucleus | 73.42 | 17.93 |
| CDX91118 | Canola | nucleus | 72.78 | 17.86 |
| KRH13395 | Soybean | nucleus | 56.33 | 12.46 |
| VIT_13s0019g00220.t01 | Wine grape | nucleus | 58.86 | 12.03 |
| KRH20750 | Soybean | nucleus | 54.43 | 12.01 |
| Zm00001d042091_P002 | Maize | cytosol, mitochondrion, nucleus, peroxisome, plastid | 53.8 | 11.84 |
| TraesCS5A01G293600.2 | Wheat | nucleus | 53.16 | 11.81 |
| TraesCS5D01G300900.1 | Wheat | nucleus | 53.16 | 11.78 |
| TraesCS5B01G292800.1 | Wheat | nucleus | 53.16 | 11.78 |
| EES04226 | Sorghum | nucleus | 52.53 | 11.62 |
| HORVU5Hr1G077690.1 | Barley | cytosol, mitochondrion, plastid, vacuole | 53.16 | 11.16 |
| GSMUA_Achr4P29380_001 | Banana | nucleus | 49.37 | 10.97 |
| CDX70436 | Canola | plastid | 6.33 | 5.99 |
| CDX91316 | Canola | cytosol | 6.96 | 3.37 |
| CDX97287 | Canola | cytosol | 6.96 | 3.37 |
| CDY52843 | Canola | nucleus | 4.43 | 3.02 |
| CDY54233 | Canola | golgi | 3.16 | 2.69 |
| CDX70097 | Canola | cytosol | 7.59 | 2.6 |
| CDX86957 | Canola | cytosol | 5.06 | 2.56 |
| CDY00226 | Canola | cytosol, nucleus, plastid | 5.06 | 2.54 |
| CDX72834 | Canola | cytosol | 6.33 | 2.51 |
| CDX96351 | Canola | cytosol | 6.33 | 2.51 |
| CDX98931 | Canola | nucleus | 7.59 | 2.5 |
| CDY08856 | Canola | cytosol | 4.43 | 2.36 |
| CDX84544 | Canola | cytosol | 4.43 | 2.33 |
| CDX68298 | Canola | cytosol | 5.7 | 2.31 |
| CDY36678 | Canola | cytosol | 5.7 | 2.31 |
| CDX84790 | Canola | cytosol | 6.96 | 2.31 |
| CDY27046 | Canola | cytosol | 6.96 | 2.31 |
| CDX96156 | Canola | cytosol | 6.96 | 2.31 |
| CDY09730 | Canola | cytosol | 6.96 | 2.29 |
| CDX90556 | Canola | cytosol | 6.96 | 2.29 |
| CDY69403 | Canola | nucleus | 2.53 | 2.16 |
| CDY34965 | Canola | cytosol | 6.33 | 2.13 |
| CDY09645 | Canola | cytosol | 6.33 | 2.11 |
| CDX67810 | Canola | cytosol | 4.43 | 1.95 |
| CDY28352 | Canola | cytosol | 5.7 | 1.89 |
| CDY05801 | Canola | cytosol | 5.7 | 1.79 |
| CDX98392 | Canola | endoplasmic reticulum, extracellular | 4.43 | 1.58 |
| CDY05802 | Canola | mitochondrion | 5.7 | 1.57 |
| CDX88026 | Canola | cytosol | 6.33 | 1.21 |
| CDX72090 | Canola | mitochondrion | 2.53 | 1.2 |
| CDY60225 | Canola | cytosol | 6.33 | 1.2 |
| CDX81101 | Canola | cytosol | 6.33 | 1.19 |
| CDX77842 | Canola | cytosol, nucleus, peroxisome | 0.63 | 1.01 |
| CDY08014 | Canola | mitochondrion | 0.63 | 0.98 |
| CDX80363 | Canola | cytosol | 5.06 | 0.94 |
| CDY50395 | Canola | cytosol, extracellular, golgi, mitochondrion | 1.9 | 0.94 |
| CDY34658 | Canola | mitochondrion | 4.43 | 0.91 |
| CDY34846 | Canola | nucleus | 4.43 | 0.77 |
| CDX79802 | Canola | cytosol, golgi | 1.9 | 0.72 |
| CDY17912 | Canola | cytosol, golgi | 1.9 | 0.72 |
| CDY15006 | Canola | cytosol | 4.43 | 0.69 |
| CDY52222 | Canola | cytosol | 4.43 | 0.62 |
| CDY03812 | Canola | cytosol | 4.43 | 0.62 |
| CDY27174 | Canola | cytosol | 0.0 | 0.0 |
| Os01t0951000-02 | Rice | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
| CDY44171 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY01533 | EnsemblPlantsGene:GSBRNA2T00112561001 | PANTHER:PTHR22836 | ProteinID:CDY01533 | ProteinID:CDY01533.1 | UniParc:UPI0004EF0F85 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g35230D
Coordinates
chrLK031927:-:431904..432564
Molecular Weight (calculated)
17920.3 Da
IEP (calculated)
8.871
GRAVY (calculated)
-0.261
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRHPSASST NINPDYHHPS APNPFDSHVD SFGAKRMRKH TQRKAVDYTS TVVRYIQLEP FVTDRFQLKS SYFVNVFVQA RTWQRDSRDM TSLQATPAAA
101: VDMLPPVAYS DNPSTSFAAK FVHSSLNKNR CSINCIVVYS CDSCLNSILL CLRCLYIC
101: VDMLPPVAYS DNPSTSFAAK FVHSSLNKNR CSINCIVVYS CDSCLNSILL CLRCLYIC
001: MPQPPMMRQS SASSTNINPD YHHPSGPFDP NVDSFGAKRM RKHTQRRAVD YTSTVVRYIQ FNELILYMEL KVESVYSIYV FVQARTWQRD SRDRTTLQPT
101: PAAAVDMLPT VAYSDNPSTS FAAKFVHASL NKNRCSINRV LWTPSGRRLI TGSQSGEFTL WNGQSFNFEM ILQAHDQPIR SMVWSHNENY MVSGDDGGTL
201: KYWQNNMNNV KANKTAHKES IRDLSFCKTD LKFCSCSDDT TVKVWDFTKC VDESSLTGHG WDVKSVDWHP TKSLLVSGGK DQLVKLWDTR SGRELCSLHG
301: HKNIVLSVKW NQNGNWLLTA SKDQIIKLYD IRTMKELQSF RGHTKDVTSL AWHPCHEEYF VSGSSDGSIC HWIVGHENPQ IEIPNAHDNS VWDLAWHPIG
401: YLLCSGSNDH TTKFWCRNRP ADNPRDVLMQ NQGYNEQGFG RQPDNFQPSE ASPIPGAFVP GLTRNEGTIP GIGIAMPFDA SSQGDHKQPL PGSMALGAPP
501: LPPGPHPSLL GSGQQQGYQQ QQQHQGHPQQ MLPMPNMPHH QLPPSSHMPL HPHHLPRPMQ MPPHGHMPPP SMPMSHQMPG SMGMQGGMNP QMSQSHFMGA
601: PSGVFQGQPN SGGPQMYPQG RGGFNRPQMI PGYNNPFQQQ QPPLPPGPPP NNNQQHQ
101: PAAAVDMLPT VAYSDNPSTS FAAKFVHASL NKNRCSINRV LWTPSGRRLI TGSQSGEFTL WNGQSFNFEM ILQAHDQPIR SMVWSHNENY MVSGDDGGTL
201: KYWQNNMNNV KANKTAHKES IRDLSFCKTD LKFCSCSDDT TVKVWDFTKC VDESSLTGHG WDVKSVDWHP TKSLLVSGGK DQLVKLWDTR SGRELCSLHG
301: HKNIVLSVKW NQNGNWLLTA SKDQIIKLYD IRTMKELQSF RGHTKDVTSL AWHPCHEEYF VSGSSDGSIC HWIVGHENPQ IEIPNAHDNS VWDLAWHPIG
401: YLLCSGSNDH TTKFWCRNRP ADNPRDVLMQ NQGYNEQGFG RQPDNFQPSE ASPIPGAFVP GLTRNEGTIP GIGIAMPFDA SSQGDHKQPL PGSMALGAPP
501: LPPGPHPSLL GSGQQQGYQQ QQQHQGHPQQ MLPMPNMPHH QLPPSSHMPL HPHHLPRPMQ MPPHGHMPPP SMPMSHQMPG SMGMQGGMNP QMSQSHFMGA
601: PSGVFQGQPN SGGPQMYPQG RGGFNRPQMI PGYNNPFQQQ QPPLPPGPPP NNNQQHQ
Arabidopsis Description
FYTransducin/WD40 repeat-like superfamily protein [Source:TAIR;Acc:AT5G13480]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.