CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27046	Canola	cytosol	74.21	73.74
CDX84790	Canola	cytosol	74.21	73.74
AT5G52820.1	Thale cress	cytosol	73.57	73.57
CDX96156	Canola	cytosol	73.57	73.11
CDY52843	Canola	nucleus	34.46	70.26
CDX98931	Canola	nucleus	69.56	68.54
GSMUA_Achr3P29050_001	Banana	nucleus	68.71	67.99
VIT_13s0064g00360.t01	Wine grape	nucleus	68.29	67.71
CDX70097	Canola	cytosol	65.96	67.53
KRH70275	Soybean	nucleus	67.44	66.46
KRH08668	Soybean	nucleus	67.23	66.25
Solyc03g112530.2.1	Tomato	nucleus	67.23	66.11
PGSC0003DMT400046634	Potato	cytosol	67.23	66.11
CDY50395	Canola	cytosol, extracellular, golgi, mitochondrion	43.34	64.26
CDX77842	Canola	cytosol, nucleus, peroxisome	10.99	52.53
CDY08014	Canola	mitochondrion	11.21	51.96
VIT_13s0064g00330.t01	Wine grape	extracellular	12.9	46.56
CDX86957	Canola	cytosol	18.39	27.88
CDY00226	Canola	cytosol, nucleus, plastid	18.18	27.3
CDX91316	Canola	cytosol	18.18	26.38
CDX97287	Canola	cytosol	17.97	26.07
CDX72090	Canola	mitochondrion	16.28	23.05
CDX70436	Canola	plastid	7.82	22.16
CDX67810	Canola	cytosol	16.7	22.01
CDX84544	Canola	cytosol	13.74	21.67
CDY08856	Canola	cytosol	13.53	21.55
CDY36678	Canola	cytosol	17.34	21.08
CDX72834	Canola	cytosol	17.55	20.85
CDX68298	Canola	cytosol	17.12	20.82
CDX96351	Canola	cytosol	17.34	20.55
CDY54233	Canola	golgi	7.82	19.89
CDX79802	Canola	cytosol, golgi	16.7	19.04
CDY17912	Canola	cytosol, golgi	16.7	18.94
CDX98392	Canola	endoplasmic reticulum, extracellular	16.49	17.61
CDY34965	Canola	cytosol	16.91	17.02
CDY27174	Canola	cytosol	5.5	16.99
CDX90556	Canola	cytosol	17.12	16.84
CDY09730	Canola	cytosol	17.12	16.84
CDY28352	Canola	cytosol	16.49	16.35
CDY44171	Canola	cytosol	5.07	15.48
CDY05801	Canola	cytosol	15.86	14.94
CDY05802	Canola	mitochondrion	15.64	12.87
CDX91118	Canola	nucleus	17.34	12.73
CDX85646	Canola	nucleus	17.34	12.67
CDX70506	Canola	nucleus	16.7	12.56
CDX78524	Canola	nucleus	17.12	12.13
CDY34658	Canola	mitochondrion	15.86	9.79
CDY60225	Canola	cytosol	16.7	9.46
CDX88026	Canola	cytosol	16.28	9.29
CDX81101	Canola	cytosol	16.49	9.27
CDX80363	Canola	cytosol	16.07	8.94
CDY34846	Canola	nucleus	16.28	8.44
CDY52222	Canola	cytosol	16.49	6.95
CDY03812	Canola	cytosol	16.49	6.95
CDY15006	Canola	cytosol	14.8	6.9
CDY01533	Canola	plastid	2.11	6.33
CDY69403	Canola	nucleus	1.69	4.32
Os01t0531300-00	Rice	endoplasmic reticulum, extracellular	0.63	1.35

Protein Annotations

MapMan:17.1.2.2.1.12	Gene3D:2.130.10.10	GO:A0A078F5C1	UniProt:A0A078F5C1	EnsemblPlants:CDY09645	ProteinID:CDY09645
ProteinID:CDY09645.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0007275	GO:GO:0008150
GO:GO:0009553	EnsemblPlantsGene:GSBRNA2T00031291001	InterPro:Gprotein_B	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
InterPro:NLE	PFAM:PF00400	PFAM:PF08154	PRINTS:PR00319	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19848	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EE8EF4
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

BnaC07g34160DBnaC07g34160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5C1]

Coordinates

chrLK031998:+:166304..168337

Molecular Weight (calculated)

52695.7 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.305

Length

473 amino acids

Sequence
(BLAST)

001: MELAMTVMCR LVDAEGIPLG DPMYIPQRAG KLQLTELANK FLNNEEKLPY AFYVSGEELR VPVGTYIEDR SVSMEEILTI VYRQEAVFRT RPVSRISASI
101: PGHRDSVLCV SFSPDGTQLA SGSGDTTVRL WDLYTQTPMF TCIGHTNWVL SVAWSPDGKH LVSGDLAGNI CCWIPETGKL DGSPLRGHKK WITSISWEPA
201: HLTYPCRRFV TSSKDEDARI WDITLKKSVT CLSGHTRGVT CVKWGGDGII YTGSQDCTIK MWQVSPEGLP CLKAQLKKHG HWVNSLALST DYVLRTGAFD
301: HTGKQYSSSP EEVRKAALKR YDQAKGEYGE RLVSGSDDFT MILWDQSVSD QPKQHLFGHQ QLVNQVCFSP NGQWIASASF DKSVRIWDGI TGAFITTLRG
401: HLGPVYQISW SPDSRMLLSG SKDSTLKIWD IGLRQLKQDL PGHADEVYAV DWSPDGERVV SGGKDKSLKL WVG

Best Arabidopsis Sequence Match ( AT5G52820.1 )
(BLAST)

001: MTMMDTDEGK TVMCLLTDPE GTHLGSAMYI PQKAGPLQLT QLVNRFLDNE EMLPYSFYVS DEELLVPVGT YLEKNKVSVE KVLTIVYQQQ AVFRIRPVNR
101: CSQTIAGHAE AVLCVSFSPD GKQLASGSGD TTVRLWDLYT ETPLFTCKGH KNWVLTVAWS PDGKHLVSGS KSGEICCWNP KKGELEGSPL TGHKKWITGI
201: SWEPVHLSSP CRRFVTSSKD GDARIWDITL KKSIICLSGH TLAVTCVKWG GDGIIYTGSQ DCTIKMWETT QGKLIRELKG HGHWINSLAL STEYVLRTGA
301: FDHTGRQYPP NEEKQKALER YNKTKGDSPE RLVSGSDDFT MFLWEPSVSK QPKKRLTGHQ QLVNHVYFSP DGKWIASASF DKSVRLWNGI TGQFVTVFRG
401: HVGPVYQVSW SADSRLLLSG SKDSTLKIWE IRTKKLKQDL PGHADEVFAV DWSPDGEKVV SGGKDRVLKL WKG

Arabidopsis Description

NLE1NLE [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.