Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27174 | Canola | cytosol | 67.74 | 68.63 |
| GSMUA_Achr8P10210_001 | Banana | cytosol | 34.19 | 55.79 |
| GSMUA_Achr8P10200_001 | Banana | cytosol | 23.23 | 40.45 |
| CDX72090 | Canola | mitochondrion | 73.55 | 34.13 |
| CDY09730 | Canola | cytosol | 78.06 | 25.16 |
| CDX90556 | Canola | cytosol | 78.06 | 25.16 |
| PGSC0003DMT400023040 | Potato | mitochondrion | 49.03 | 24.76 |
| CDY34965 | Canola | cytosol | 74.19 | 24.47 |
| CDY28352 | Canola | cytosol | 72.9 | 23.69 |
| Solyc09g010620.1.1 | Tomato | cytosol | 24.52 | 23.31 |
| KRH37088 | Soybean | nucleus | 70.97 | 23.06 |
| KRH12069 | Soybean | nucleus | 70.32 | 22.9 |
| Os03t0339100-01 | Rice | nucleus | 69.03 | 22.67 |
| KXG25821 | Sorghum | cytosol | 69.03 | 22.34 |
| TraesCS3A01G175600.2 | Wheat | plastid | 67.74 | 21.97 |
| Zm00001d033309_P003 | Maize | cytosol | 68.39 | 21.95 |
| TraesCS3B01G205300.1 | Wheat | cytosol | 67.74 | 21.92 |
| TraesCS3D01G181100.1 | Wheat | cytosol | 67.74 | 21.92 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 66.45 | 21.19 |
| HORVU3Hr1G035450.7 | Barley | mitochondrion | 67.74 | 20.51 |
| CDY54233 | Canola | golgi | 8.39 | 6.99 |
| CDY50395 | Canola | cytosol, extracellular, golgi, mitochondrion | 12.9 | 6.27 |
| CDX72834 | Canola | cytosol | 15.48 | 6.03 |
| CDX86957 | Canola | cytosol | 11.61 | 5.77 |
| CDX96351 | Canola | cytosol | 14.84 | 5.76 |
| CDY00226 | Canola | cytosol, nucleus, plastid | 11.61 | 5.71 |
| CDY36678 | Canola | cytosol | 14.19 | 5.66 |
| CDX91316 | Canola | cytosol | 11.61 | 5.52 |
| CDX97287 | Canola | cytosol | 11.61 | 5.52 |
| CDX68298 | Canola | cytosol | 13.55 | 5.4 |
| CDY09645 | Canola | cytosol | 15.48 | 5.07 |
| CDX67810 | Canola | cytosol | 10.97 | 4.74 |
| CDY08856 | Canola | cytosol | 9.03 | 4.71 |
| CDX84544 | Canola | cytosol | 9.03 | 4.67 |
| CDX84790 | Canola | cytosol | 14.19 | 4.62 |
| CDY27046 | Canola | cytosol | 14.19 | 4.62 |
| CDX96156 | Canola | cytosol | 14.19 | 4.62 |
| CDX70097 | Canola | cytosol | 13.55 | 4.55 |
| CDX98931 | Canola | nucleus | 12.9 | 4.17 |
| CDY34658 | Canola | mitochondrion | 20.0 | 4.05 |
| CDX79802 | Canola | cytosol, golgi | 9.68 | 3.61 |
| CDX98392 | Canola | endoplasmic reticulum, extracellular | 10.32 | 3.61 |
| CDY17912 | Canola | cytosol, golgi | 9.68 | 3.6 |
| CDX91118 | Canola | nucleus | 14.84 | 3.57 |
| CDX70506 | Canola | nucleus | 14.19 | 3.5 |
| CDX85646 | Canola | nucleus | 14.19 | 3.4 |
| CDY34846 | Canola | nucleus | 20.0 | 3.4 |
| CDY05801 | Canola | cytosol | 10.97 | 3.39 |
| CDX78524 | Canola | nucleus | 14.19 | 3.29 |
| CDX88026 | Canola | cytosol | 15.48 | 2.9 |
| CDX80363 | Canola | cytosol | 15.48 | 2.82 |
| CDY05802 | Canola | mitochondrion | 10.32 | 2.78 |
| CDY60225 | Canola | cytosol | 14.84 | 2.75 |
| CDX81101 | Canola | cytosol | 14.84 | 2.73 |
| CDY52222 | Canola | cytosol | 19.35 | 2.67 |
| CDY03812 | Canola | cytosol | 19.35 | 2.67 |
| CDY15006 | Canola | cytosol | 17.42 | 2.66 |
| GSMUA_Achr8P10190_001 | Banana | cytosol, plastid | 4.52 | 2.54 |
| CDX70436 | Canola | plastid | 2.58 | 2.4 |
| CDX77842 | Canola | cytosol, nucleus, peroxisome | 1.29 | 2.02 |
| CDY08014 | Canola | mitochondrion | 1.29 | 1.96 |
| CDY52843 | Canola | nucleus | 1.94 | 1.29 |
| CDY69403 | Canola | nucleus | 0.0 | 0.0 |
| CDY01533 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY44171 | EnsemblPlantsGene:GSBRNA2T00079646001 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR19923 |
| ProteinID:CDY44171 | ProteinID:CDY44171.1 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004EED20A | UniProt:A0A078I2X1 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC01g22210DBnaC01g22210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2X1]
Coordinates
chrLK032581:-:148395..149325
Molecular Weight (calculated)
17473.9 Da
IEP (calculated)
7.903
GRAVY (calculated)
-0.463
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MITCCKHMIW SEMSDYYIQE KRWRLLTHHK KSVRTMALHP KENAFASASA DNTNKFGLPK GEFCHNMLSQ QMTIINVVAG VMVTGVYGSG TETFVQPGSL
101: EGEAGIYAAC YDQTGSRLVT CEADKTIKMS KEDENATPET HPVNFKPPKD IRRFY
101: EGEAGIYAAC YDQTGSRLVT CEADKTIKMS KEDENATPET HPVNFKPPKD IRRFY
001: MTMIALNREV ETQSLKKLSL KSVRRAREIF SPVHGQFPQP DPESKRIRLC HKIQVAFGGV EPASKPTRIA DHNSEKTAPL KALALPGPKG SKELRKSATE
101: KALVVGPTLP PRDLNNTGNP GKSTAILPAP GSFSERNLST AALMERMPSR WPRPEWHAPW KNYRVLQGHL GWVRSVAFDP SNEWFCTGSA DRTIKIWDVA
201: TGVLKLTLTG HIGQVRGLAV SNRHTYMFSA GDDKQVKCWD LEQNKVIRSY HGHLHGVYCL ALHPTLDVVL TGGRDSVCRV WDIRTKMQIF VLPHDSDVFS
301: VLARPTDPQV ITGSHDSTIK FWDLRYGKSM ATITNHKKTV RAMALHPKEN DFVSASADNI KKFSLPKGEF CHNMLSLQRD IINAVAVNED GVMVTGGDKG
401: GLWFWDWKSG HNFQRAETIV QPGSLESEAG IYAACYDQTG SRLVTCEGDK TIKMWKEDED ATPETHPLNF KPPKEIRRF
101: KALVVGPTLP PRDLNNTGNP GKSTAILPAP GSFSERNLST AALMERMPSR WPRPEWHAPW KNYRVLQGHL GWVRSVAFDP SNEWFCTGSA DRTIKIWDVA
201: TGVLKLTLTG HIGQVRGLAV SNRHTYMFSA GDDKQVKCWD LEQNKVIRSY HGHLHGVYCL ALHPTLDVVL TGGRDSVCRV WDIRTKMQIF VLPHDSDVFS
301: VLARPTDPQV ITGSHDSTIK FWDLRYGKSM ATITNHKKTV RAMALHPKEN DFVSASADNI KKFSLPKGEF CHNMLSLQRD IINAVAVNED GVMVTGGDKG
401: GLWFWDWKSG HNFQRAETIV QPGSLESEAG IYAACYDQTG SRLVTCEGDK TIKMWKEDED ATPETHPLNF KPPKEIRRF
Arabidopsis Description
PRL2Protein pleiotropic regulator PRL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39190]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.