CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05801	Canola	cytosol	86.09	98.61
CDY69403	Canola	nucleus	30.96	96.22
AT5G50230.1	Thale cress	cytosol	79.65	89.98
KRH03886	Soybean	nucleus	65.22	72.96
KRH57171	Soybean	cytosol	65.04	72.76
PGSC0003DMT400039207	Potato	cytosol	62.09	70.14
Solyc03g111740.2.1	Tomato	cytosol	58.09	69.29
VIT_17s0000g09750.t01	Wine grape	cytosol	62.26	69.11
GSMUA_Achr8P28660_001	Banana	cytosol	36.87	62.91
GSMUA_Achr2P06000_001	Banana	cytosol	50.78	61.6
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	9.22	56.38
Os03t0746600-01	Rice	nucleus	47.83	53.82
Zm00001d033994_P002	Maize	mitochondrion, nucleus	46.96	53.25
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	44.7	49.9
TraesCS5D01G394200.1	Wheat	cytosol	44.7	49.81
KXG37566	Sorghum	plastid	46.96	46.96
CDX84544	Canola	cytosol	12.0	23.0
CDY08856	Canola	cytosol	11.83	22.9
CDX86957	Canola	cytosol	11.65	21.47
CDX67810	Canola	cytosol	13.39	21.45
CDY00226	Canola	cytosol, nucleus, plastid	11.65	21.27
CDX77842	Canola	cytosol, nucleus, peroxisome	3.65	21.21
CDY08014	Canola	mitochondrion	3.65	20.59
CDY54233	Canola	golgi	6.43	19.89
CDX79802	Canola	cytosol, golgi	14.09	19.52
CDY17912	Canola	cytosol, golgi	14.09	19.42
CDX91316	Canola	cytosol	10.96	19.33
CDX70436	Canola	plastid	5.57	19.16
CDX97287	Canola	cytosol	10.78	19.02
CDX96351	Canola	cytosol	12.87	18.55
CDX72834	Canola	cytosol	12.7	18.34
CDX68298	Canola	cytosol	12.17	17.99
CDY36678	Canola	cytosol	12.0	17.74
CDX98392	Canola	endoplasmic reticulum, extracellular	13.57	17.61
CDX70097	Canola	cytosol	13.39	16.67
CDX98931	Canola	nucleus	13.91	16.67
CDY52843	Canola	nucleus	6.43	15.95
CDX84790	Canola	cytosol	13.04	15.76
CDY27046	Canola	cytosol	13.04	15.76
CDX96156	Canola	cytosol	13.04	15.76
CDY50395	Canola	cytosol, extracellular, golgi, mitochondrion	8.7	15.67
CDY09645	Canola	cytosol	12.87	15.64
CDX72090	Canola	mitochondrion	8.7	14.97
CDY34965	Canola	cytosol	11.3	13.83
CDY09730	Canola	cytosol	11.48	13.72
CDX90556	Canola	cytosol	11.48	13.72
CDY28352	Canola	cytosol	11.13	13.42
CDX70506	Canola	nucleus	12.17	11.13
CDY27174	Canola	cytosol	2.96	11.11
CDX91118	Canola	nucleus	12.35	11.02
CDX85646	Canola	nucleus	12.17	10.82
CDX78524	Canola	nucleus	12.35	10.63
CDY44171	Canola	cytosol	2.78	10.32
CDY34658	Canola	mitochondrion	13.04	9.79
CDX88026	Canola	cytosol	13.39	9.29
CDX81101	Canola	cytosol	13.04	8.92
CDY60225	Canola	cytosol	12.87	8.86
CDX80363	Canola	cytosol	12.87	8.71
CDY34846	Canola	nucleus	13.04	8.22
CDY52222	Canola	cytosol	13.39	6.86
CDY03812	Canola	cytosol	13.39	6.86
CDY15006	Canola	cytosol	10.61	6.02
CDY01533	Canola	plastid	1.57	5.7

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:Autophagy-rel_prot_16	EnsemblPlants:CDY05802	ProteinID:CDY05802	ProteinID:CDY05802.1
ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00120889001
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PFAM:PF08614	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19878	PANTHER:PTHR19878:SF8	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0004EF24E7	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

BnaA10g06180D

Coordinates

chrLK031965:-:35569..39324

Molecular Weight (calculated)

63187.0 Da

IEP (calculated)

6.815

GRAVY (calculated)

-0.325

Length

575 amino acids

Sequence
(BLAST)

001: MPGSSLIMVG VLAQRGVVAI GLRAMEGPLL KDLRSQRNTR VSGPVVVYCG SLSCHNSHSS SMASSVWSQE EKAMEAIKDA LRALRQRHLL EEGAHGPAIS
101: ALSKPMISQG SEWKEKTEKL EIELQQCYKA QSRLSEQLVI EVAESRTSKS SLQDKELLIL DFDKDLSQTR EECTRLQQEL EEKTKTLDLL ITENKEVRSQ
201: LEEMTNRAQK AESENKMLID RWMLQKMQDA ERLNEANALY EEMLAKLKAN GLENLARQQV DGIVRRNEDG TDHFVESTIP STCGHRIHAH EGGCGSILFE
301: YSSRTLFTGG QAGPVKMWDT NSGSLIKSLN GSLGNILDLA ITHDNKSLIA ASSSNNLFVW DVNSGRVRHT LTGHTDKVCA VDVSKFSSRH VVSAAYDRTI
401: KLWDLQKGYC TNTVLFTSNC NAICLSIDGL TVFSGHMDGN LRLWDIQTGK LLSEVAGHSS AITSVSLSRN GNMILTSGRD NVHNVFDTRT LEICGTLRAS
501: GNRLASNWSR SCISPDDEYV AAGSADGTVH VWSISKGSIV STLKEQTSPI LCCSWSGIGK PLASADKNGY VCTWT

Best Arabidopsis Sequence Match ( AT5G50230.1 )
(BLAST)

001: MVQEEKAMEA INDALRALRK RHLLEEGAHA PAISALSKPL ISQGSEWKEK TEKLETELQQ CYKAQSRLSE QLVIEVAESR TSKAILQEKE LLINDLQKEL
101: TQRREDCTRL QEELEEKTKT VDVLIAENLE IRSQLEEMTS RVQKAETENK MLIDRWMLQK MQDAERLNEA NDLYEEMLAK LKANGLETLA RQQVDGIVRR
201: NEDGTDHFVE STIPSTCANR IHAHEGGCGS IVFEYNSGTL FTGGQDRAVK MWDTNSGTLI KSLYGSLGNI LDMAVTHDNK SVIAATSSNN LFVWDVSSGR
301: VRHTLTGHTD KVCAVDVSKF SSRHVVSAAY DRTIKLWDLH KGYCTNTVLF TSNCNAICLS IDGLTVFSGH MDGNLRLWDI QTGKLLSEVA GHSSAVTSVS
401: LSRNGNRILT SGRDNVHNVF DTRTLEICGT LRASGNRLAS NWSRSCISPD DDYVAAGSAD GSVHVWSLSK GNIVSILKEQ TSPILCCSWS GIGKPLASAD
501: KNGYVCTWT

Arabidopsis Description

ATG16Autophagy-related protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.