CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03886	Soybean	nucleus	95.33	95.33
VIT_17s0000g09750.t01	Wine grape	cytosol	76.65	76.06
PGSC0003DMT400039207	Potato	cytosol	73.35	74.07
CDY05801	Canola	cytosol	71.6	73.31
AT5G50230.1	Thale cress	cytosol	72.57	73.28
Solyc03g111740.2.1	Tomato	cytosol	68.48	73.03
GSMUA_Achr8P28660_001	Banana	cytosol	44.94	68.55
GSMUA_Achr2P06000_001	Banana	cytosol	61.09	66.24
CDY05802	Canola	mitochondrion	72.76	65.04
Bra037932.1-P	Field mustard	mitochondrion	72.57	64.87
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	10.51	57.45
Os03t0746600-01	Rice	nucleus	56.81	57.14
Zm00001d033994_P002	Maize	mitochondrion, nucleus	56.03	56.8
TraesCS5D01G394200.1	Wheat	cytosol	51.75	51.55
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	51.17	51.07
KXG37566	Sorghum	plastid	55.84	49.91
KRH59511	Soybean	cytosol, nucleus	15.37	26.33
KRH43376	Soybean	nucleus	15.37	24.61
KRH32024	Soybean	cytosol	15.18	24.45
KRH21524	Soybean	cytosol	10.7	24.44
KRH71413	Soybean	nucleus	14.98	24.06
KRG94875	Soybean	nucleus	16.15	24.06
KRH06660	Soybean	nucleus	16.15	24.06
KRH50874	Soybean	nucleus	14.4	22.49
KRH02239	Soybean	nucleus	14.2	22.05
KRH35009	Soybean	cytosol	5.25	19.57
KRG91764	Soybean	cytoskeleton, cytosol, nucleus	14.2	18.67
KRH37298	Soybean	cytosol	12.84	17.41
KRH08668	Soybean	nucleus	16.15	17.29
KRH70275	Soybean	nucleus	16.15	17.29
KRH55267	Soybean	cytosol	4.28	15.49
KRH35010	Soybean	nucleus	4.47	14.29
KRH37088	Soybean	nucleus	13.04	14.05
KRH12069	Soybean	nucleus	12.84	13.87
KRH20528	Soybean	cytosol	16.15	10.67
KRH56498	Soybean	cytosol	14.98	10.14
KRG93160	Soybean	cytosol	14.98	10.14
KRH20750	Soybean	nucleus	13.62	9.78
KRH13395	Soybean	nucleus	13.42	9.66
KRH10790	Soybean	cytosol	14.4	8.97
KRH49977	Soybean	cytosol	10.89	8.18
KRH21526	Soybean	cytosol, peroxisome	3.5	3.01

Protein Annotations

EntrezGene:100778336	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02002814	InterPro:Autophagy-rel_prot_16	ncoils:Coil
InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_05G043700	GO:GO:0000045	GO:GO:0000421	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
UniProt:I1K068	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KRH57171	ProteinID:KRH57171
ProteinID:KRH57171.1	PFAM:PF00400	PFAM:PF08614	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19878	PANTHER:PTHR19878:SF8	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000233A428
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

hypothetical protein

Coordinates

chr5:+:3901985..3905389

Molecular Weight (calculated)

56753.5 Da

IEP (calculated)

6.623

GRAVY (calculated)

-0.285

Length

514 amino acids

Sequence
(BLAST)

001: MAKAGKSQEE IASEAIKHTL RALRKRHLLE EAAHAPAVLA LSRPIVSQGS EWKEKEENLQ VELQQCYKAQ SRLSEQLVVE VAESRASKAL LQEKENALAD
101: LQKELTELRD ECSQLKVDLE EKIKSLEVIV SENSELKAQL EQMTIKANKA EAENKMLIDR WMLEKMKDAE RLNEANALYE EMVEKLRASG LEQLARRQVD
201: GIVRQSEEGA EFFLESNIPS ICKYRLRAHE GGCASMLFEY NSSKLITGGQ DRLVKMWDAN TGSLSSTLQG CLGSVLDLTI THDNRSVIAA SSSNNLYVWD
301: VNSGRVRHTL TGHTDKVCAV DVSKISSRHV VSAAYDRTIK VWDLVKGYCT NTIIFHSNCN ALSFSMDGQT IFSGHVDGNL RLWDIQSGKL LSEVAAHSLA
401: VTSLSLSRNG NVVLTSGRDN LHNLFDVRSL EVCGTLKAMG NRVASNWSRS CISPDDNHVA AGSADGSVYI WSISKGDIVS TLKEHTSSVL CCRWSGIGKP
501: LASADKNGIV CVWT

Best Arabidopsis Sequence Match ( AT5G50230.1 )
(BLAST)

001: MVQEEKAMEA INDALRALRK RHLLEEGAHA PAISALSKPL ISQGSEWKEK TEKLETELQQ CYKAQSRLSE QLVIEVAESR TSKAILQEKE LLINDLQKEL
101: TQRREDCTRL QEELEEKTKT VDVLIAENLE IRSQLEEMTS RVQKAETENK MLIDRWMLQK MQDAERLNEA NDLYEEMLAK LKANGLETLA RQQVDGIVRR
201: NEDGTDHFVE STIPSTCANR IHAHEGGCGS IVFEYNSGTL FTGGQDRAVK MWDTNSGTLI KSLYGSLGNI LDMAVTHDNK SVIAATSSNN LFVWDVSSGR
301: VRHTLTGHTD KVCAVDVSKF SSRHVVSAAY DRTIKLWDLH KGYCTNTVLF TSNCNAICLS IDGLTVFSGH MDGNLRLWDI QTGKLLSEVA GHSSAVTSVS
401: LSRNGNRILT SGRDNVHNVF DTRTLEICGT LRASGNRLAS NWSRSCISPD DDYVAAGSAD GSVHVWSLSK GNIVSILKEQ TSPILCCSWS GIGKPLASAD
501: KNGYVCTWT

Arabidopsis Description

ATG16Autophagy-related protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.