Factsheet for Zm00001d033994_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

cytosol 1
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37566	Sorghum	plastid	93.49	82.43
Os03t0746600-01	Rice	nucleus	83.04	82.39
TraesCS5D01G394200.1	Wheat	cytosol	77.71	76.36
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	77.32	76.12
GSMUA_Achr8P28660_001	Banana	cytosol	39.25	59.05
PGSC0003DMT400039207	Potato	cytosol	56.41	56.19
GSMUA_Achr2P06000_001	Banana	cytosol	52.47	56.12
KRH03886	Soybean	nucleus	56.8	56.03
KRH57171	Soybean	cytosol	56.8	56.03
Solyc03g111740.2.1	Tomato	cytosol	52.47	55.19
AT5G50230.1	Thale cress	cytosol	54.64	54.42
CDY05801	Canola	cytosol	53.25	53.78
VIT_17s0000g09750.t01	Wine grape	cytosol	54.44	53.28
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	9.86	53.19
Bra037932.1-P	Field mustard	mitochondrion	53.65	47.3
CDY05802	Canola	mitochondrion	53.25	46.96
Zm00001d050708_P002	Maize	cytosol	14.6	24.42
Zm00001d036709_P001	Maize	cytosol	15.19	23.62
Zm00001d033849_P002	Maize	extracellular, nucleus	14.79	23.51
Zm00001d046930_P001	Maize	cytosol, extracellular, plasma membrane	14.79	23.01
Zm00001d021866_P001	Maize	plastid	14.6	22.56
Zm00001d021868_P001	Maize	plastid	14.4	22.26
Zm00001d039211_P006	Maize	cytosol	16.37	16.7
Zm00001d041945_P003	Maize	cytosol	12.62	15.06
Zm00001d033309_P003	Maize	cytosol	13.41	14.08
Zm00001d011779_P005	Maize	cytosol	12.43	12.86
Zm00001d033713_P002	Maize	cytosol, extracellular, plastid	12.43	12.57
Zm00001d042091_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome, plastid	13.61	9.61
Zm00001d001828_P033	Maize	cytosol	14.2	7.81
Zm00001d012620_P025	Maize	cytosol	12.62	7.67
Zm00001d026621_P006	Maize	cytosol	13.61	7.58
Zm00001d032598_P023	Maize	cytosol, plasma membrane, plastid	13.61	7.48

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:Autophagy-rel_prot_16	EMBL:BT067397	UniProt:C0PGH8	ncoils:Coil
InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	ProteinID:ONM09149.1	PFAM:PF00400	PFAM:PF08614	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19878	PANTHER:PTHR19878:SF8	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000195CB6F	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
EnsemblPlantsGene:Zm00001d033994	EnsemblPlants:Zm00001d033994_P002	EnsemblPlants:Zm00001d033994_T002	SEG:seg	:	:

Description

autophagy16LAutophagy-related protein 16

Coordinates

chr1:+:280605396..280608220

Molecular Weight (calculated)

55525.9 Da

IEP (calculated)

6.784

GRAVY (calculated)

-0.312

Length

507 amino acids

Sequence
(BLAST)

001: MTMVEAEAGR AAIRRALRSL KRRHLAEEGA HSPAIEALTR PFAAHALEWK EKAEKHELEL QQCYKAQSRL SEQLVTEIEE GKVSKALLKE KEAMVTSLQA
101: ELEKTSEENV QLKQSLDEKI KALDLLIQEH QTVKSELEQA LTKLKAAEDE NQNLVDRWML EKMKDAERLN EANAMYEEMV LKLKTAGVGG IQLNAQQETD
201: GIIRRSEAGY IETPIPSTCT ITIRAHDGGC GALMFEHNSD KLISGGQDQT VKIWGASTGA LTATLHGCLG SVNDLAVTND NKFVIAACSS NKLFVWEVSG
301: GRPRHTLTGH TKNVSSVDAS WVKSFVVASS SSDRTIKVWD LQTGFCKSTI MSASNPNSLA FIDGDTICSG HRDGNLRLWD IRSGKCTTQI AAHLDVTSVC
401: VSRSRNFVLT SGRDNVHNLF DVRTLEICGT FRAMGNRVVS SWGKPSISPD ENCIAAGSSD GSVYIWSRLK NGTPTILEGH SSPVLASAWC GLGALATSDR
501: NHIYIWS

Best Arabidopsis Sequence Match ( AT5G50230.1 )
(BLAST)

001: MVQEEKAMEA INDALRALRK RHLLEEGAHA PAISALSKPL ISQGSEWKEK TEKLETELQQ CYKAQSRLSE QLVIEVAESR TSKAILQEKE LLINDLQKEL
101: TQRREDCTRL QEELEEKTKT VDVLIAENLE IRSQLEEMTS RVQKAETENK MLIDRWMLQK MQDAERLNEA NDLYEEMLAK LKANGLETLA RQQVDGIVRR
201: NEDGTDHFVE STIPSTCANR IHAHEGGCGS IVFEYNSGTL FTGGQDRAVK MWDTNSGTLI KSLYGSLGNI LDMAVTHDNK SVIAATSSNN LFVWDVSSGR
301: VRHTLTGHTD KVCAVDVSKF SSRHVVSAAY DRTIKLWDLH KGYCTNTVLF TSNCNAICLS IDGLTVFSGH MDGNLRLWDI QTGKLLSEVA GHSSAVTSVS
401: LSRNGNRILT SGRDNVHNVF DTRTLEICGT LRASGNRLAS NWSRSCISPD DDYVAAGSAD GSVHVWSLSK GNIVSILKEQ TSPILCCSWS GIGKPLASAD
501: KNGYVCTWT

Arabidopsis Description

ATG16Autophagy-related protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.