Factsheet for Zm00001d039211_P006

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18812	Sorghum	cytosol	93.16	96.66
Os10t0104500-01	Rice	cytosol	87.73	90.83
Os11t0594200-01	Rice	cytosol	87.32	90.42
TraesCS1A01G443600.1	Wheat	cytosol	85.92	89.89
TraesCS1B01G478100.1	Wheat	cytosol	85.51	89.29
TraesCS1D01G451700.1	Wheat	cytosol	85.31	89.26
HORVU1Hr1G095080.1	Barley	cytosol, plastid	84.51	83.5
GSMUA_Achr3P29050_001	Banana	nucleus	77.67	80.75
VIT_13s0064g00360.t01	Wine grape	nucleus	73.84	76.94
Solyc03g112530.2.1	Tomato	nucleus	74.45	76.92
PGSC0003DMT400046634	Potato	cytosol	74.45	76.92
KRH08668	Soybean	nucleus	73.04	75.62
KRH70275	Soybean	nucleus	72.84	75.42
AT5G52820.1	Thale cress	cytosol	70.02	73.57
Bra009201.1-P	Field mustard	nucleus	61.37	63.54
CDX98931	Canola	nucleus	60.76	62.92
CDX70097	Canola	cytosol	58.15	62.55
VIT_13s0064g00330.t01	Wine grape	extracellular	14.69	55.73
CDY08014	Canola	mitochondrion	10.06	49.02
CDX77842	Canola	cytosol, nucleus, peroxisome	9.05	45.45
Zm00001d033849_P002	Maize	extracellular, nucleus	21.13	32.92
Zm00001d021866_P001	Maize	plastid	19.52	29.57
Zm00001d021868_P001	Maize	plastid	19.52	29.57
Zm00001d036709_P001	Maize	cytosol	16.5	25.15
Zm00001d046930_P001	Maize	cytosol, extracellular, plasma membrane	16.3	24.85
Zm00001d050708_P002	Maize	cytosol	14.08	23.1
Zm00001d041945_P003	Maize	cytosol	15.9	18.59
Zm00001d033309_P003	Maize	cytosol	17.5	18.01
Zm00001d033994_P002	Maize	mitochondrion, nucleus	16.7	16.37
Zm00001d011779_P005	Maize	cytosol	15.69	15.92
Zm00001d033713_P002	Maize	cytosol, extracellular, plastid	12.27	12.18
Zm00001d042091_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome, plastid	16.5	11.42
Zm00001d012620_P025	Maize	cytosol	16.1	9.59
Zm00001d026621_P006	Maize	cytosol	16.1	8.79
Zm00001d001828_P033	Maize	cytosol	16.3	8.79
Zm00001d032598_P023	Maize	cytosol, plasma membrane, plastid	15.29	8.23

Protein Annotations

EntrezGene:100282591	MapMan:17.1.2.2.1.12	Gene3D:2.130.10.10	UniProt:A0A1D6MEH7	ProteinID:AQK89044.1	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005730	InterPro:Gprotein_B	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
InterPro:NLE	PFAM:PF00400	PFAM:PF08154	PRINTS:PR00319	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000844608C	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d039211	EnsemblPlants:Zm00001d039211_P006
EnsemblPlants:Zm00001d039211_T006	:	:	:	:	:

Description

Notchless-like protein isoform 1%3B Notchless-like protein isoform 2

Coordinates

chr6:+:172597219..172606774

Molecular Weight (calculated)

55177.1 Da

IEP (calculated)

8.474

GRAVY (calculated)

-0.227

Length

497 amino acids

Sequence
(BLAST)

001: MDIDASASVM CQLLSPEGDP LGSALYLPQN VGPPQLQEIV NQLLHNEEKL PYAFYVGDEE LSVHLGAYMR QKNANVEVTL RIVCQPQALF RIRPVNRCSA
101: TIAGHTEAVI AVSFSPDGKS LASGSGDTTV RFWDLSTQTP LFTCKGECSV PYPCLPVILL QCCSFLKFWS LRHKNWVLCI AWSPDGKHLV SGSKSGELIL
201: WDPKTGNQLG TPLMGHRKWI TAVSWEPVHL QSPCRRFVSA SKDGDARIWD ITTRKCVISL TGHTSSVTCV KWGGDGLIYT GSQDCLIKVW ETSQGKLVKT
301: LKGHGHWVNS LALSTEYVLR TGAYDHTGKT FSTAEEMKEA ALARYKKMRG NAPERLVSGS DDFTMFLWEP TISKQPKARM TGHQKLVNHV YFSPDGQWLA
401: SASFDKSVKL WNGITGKFVA AFRGHVADVY QISWSADSRL LLSGSKDSTL KIWDIRTHKL KMDLPGHADE VYTVDWSPDG EKVASGGKDR VLKLWMN

Best Arabidopsis Sequence Match ( AT5G52820.1 )
(BLAST)

001: MTMMDTDEGK TVMCLLTDPE GTHLGSAMYI PQKAGPLQLT QLVNRFLDNE EMLPYSFYVS DEELLVPVGT YLEKNKVSVE KVLTIVYQQQ AVFRIRPVNR
101: CSQTIAGHAE AVLCVSFSPD GKQLASGSGD TTVRLWDLYT ETPLFTCKGH KNWVLTVAWS PDGKHLVSGS KSGEICCWNP KKGELEGSPL TGHKKWITGI
201: SWEPVHLSSP CRRFVTSSKD GDARIWDITL KKSIICLSGH TLAVTCVKWG GDGIIYTGSQ DCTIKMWETT QGKLIRELKG HGHWINSLAL STEYVLRTGA
301: FDHTGRQYPP NEEKQKALER YNKTKGDSPE RLVSGSDDFT MFLWEPSVSK QPKKRLTGHQ QLVNHVYFSP DGKWIASASF DKSVRLWNGI TGQFVTVFRG
401: HVGPVYQVSW SADSRLLLSG SKDSTLKIWE IRTKKLKQDL PGHADEVFAV DWSPDGEKVV SGGKDRVLKL WKG

Arabidopsis Description

NLE1NLE [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.