Factsheet for Zm00001d042091_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, mitochondrion, plastid, cytosol, nucleus

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04226	Sorghum	nucleus	96.1	96.64
TraesCS5A01G293600.2	Wheat	nucleus	81.06	81.86
TraesCS5D01G300900.1	Wheat	nucleus	81.2	81.77
TraesCS5B01G292800.1	Wheat	nucleus	81.06	81.63
Os01t0951000-02	Rice	cytosol, mitochondrion, nucleus	32.03	81.27
HORVU5Hr1G077690.1	Barley	cytosol, mitochondrion, plastid, vacuole	83.43	79.55
GSMUA_Achr4P29380_001	Banana	nucleus	68.52	69.2
KRH13395	Soybean	nucleus	65.46	65.83
Bra006202.1-P	Field mustard	nucleus	60.31	65.41
AT5G13480.2	Thale cress	nucleus	59.61	65.14
KRH20750	Soybean	nucleus	64.62	64.8
Bra023416.1-P	Field mustard	nucleus	58.22	64.61
VIT_13s0019g00220.t01	Wine grape	nucleus	68.25	63.39
Solyc08g067040.2.1	Tomato	nucleus	64.76	60.86
CDY01533	Canola	plastid	11.84	53.8
Zm00001d021868_P001	Maize	plastid	11.28	24.7
Zm00001d021866_P001	Maize	plastid	11.0	24.09
Zm00001d033849_P002	Maize	extracellular, nucleus	10.03	22.57
Zm00001d050708_P002	Maize	cytosol	9.47	22.44
Zm00001d036709_P001	Maize	cytosol	8.5	18.71
Zm00001d046930_P001	Maize	cytosol, extracellular, plasma membrane	8.5	18.71
Zm00001d041945_P003	Maize	cytosol	9.89	16.71
Zm00001d039211_P006	Maize	cytosol	11.42	16.5
Zm00001d033309_P003	Maize	cytosol	10.31	15.32
Zm00001d011779_P005	Maize	cytosol	9.89	14.49
Zm00001d033994_P002	Maize	mitochondrion, nucleus	9.61	13.61
Zm00001d033713_P002	Maize	cytosol, extracellular, plastid	9.33	13.37
Zm00001d012620_P025	Maize	cytosol	11.98	10.31
Zm00001d001828_P033	Maize	cytosol	12.95	10.09
Zm00001d026621_P006	Maize	cytosol	12.53	9.89
Zm00001d032598_P023	Maize	cytosol, plasma membrane, plastid	11.14	8.67

Protein Annotations

EntrezGene:100381986	MapMan:16.2.1.2.7	Gene3D:2.130.10.10	EMBL:BT062808	UniProt:C0P3D9	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007275	GO:GO:0008150	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009908
GO:GO:0009909	GO:GO:0080008	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	ProteinID:ONM34533.1
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22836	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0001948B80	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d042091	EnsemblPlants:Zm00001d042091_P002	EnsemblPlants:Zm00001d042091_T002	SEG:seg	:

Description

Flowering time control protein FY

Coordinates

chr3:+:150530556..150544017

Molecular Weight (calculated)

78652.1 Da

IEP (calculated)

9.334

GRAVY (calculated)

-0.657

Length

718 amino acids

Sequence
(BLAST)

001: MMRQQQQQLP PPPQHPPPQA SSAAGGGGGG EFYRGPPMRQ LSAASSTNLP PDYAAHPAPP SQQQHQPPYD AYGDSFGAKR MRKPVQRRTV DYTSSVVRYV
101: QARMWQRDAR DRFTLQPTPA AVLDMLPSVA YPDNPSTSFA AKFVHSSINK NRCSINRVLW TPTGRRLITG SQSGEFTLWN GQSFNFEMIL QAHDLPVRSM
201: VWSHNENWMV TGDDGGAIKY WQSNMNNVKV NKTAHRESVR GLSFSRTDLK FCSCSDDRTV KVWDFARCQE EKSLTGHGWD VKTVDWHPTK SLLVSGGKDY
301: LVKLWDAKSG RELSSFHGHK NIVHCVKWNQ NGNWVLTASK DQIIKLYDIR SMKELQSFRG HTKDVTALAW HPFHEEYFVS GSFDGAIFHW LVGHEAPQIE
401: ISNAHDSSVW DLSWHPVGYL LCSGGNDHAT KFWCRNRPGD LTRDRYNSGQ MQGFGDQHAA FGARGMGGFQ MPEPPITPGP FAPGLSRNEG TIPGIGVAMT
501: LAGQSFDGSD GEQRPSIPGL PPGQPPLPPG PHPSLLGQQQ QYQQIPQQQH PQFSQPPPPN MPQLQAPAHM LSHSQGSRPT LPQLPPMGGP SVPSQVNPPL
601: PPMPHPTAMH GSQSQMMPQM PQHMMGLNQM HAGSVPPGTV PPMGGFPSGM GNIQGASGSS GVQNFPMGGM YNRPQGQMAP QGQMTSIPGL SSYQGMGNVG
701: LTPPPPQHPP PRGGSATQ

Best Arabidopsis Sequence Match ( AT5G13480.1 )
(BLAST)

001: MYAGGDMHRG SQMPQPPMMR QSSASSTNIN PDYHHPSGPF DPNVDSFGAK RMRKHTQRRA VDYTSTVVRY IQARTWQRDS RDRTTLQPTP AAAVDMLPTV
101: AYSDNPSTSF AAKFVHASLN KNRCSINRVL WTPSGRRLIT GSQSGEFTLW NGQSFNFEMI LQAHDQPIRS MVWSHNENYM VSGDDGGTLK YWQNNMNNVK
201: ANKTAHKESI RDLSFCKTDL KFCSCSDDTT VKVWDFTKCV DESSLTGHGW DVKSVDWHPT KSLLVSGGKD QLVKLWDTRS GRELCSLHGH KNIVLSVKWN
301: QNGNWLLTAS KDQIIKLYDI RTMKELQSFR GHTKDVTSLA WHPCHEEYFV SGSSDGSICH WIVGHENPQI EIPNAHDNSV WDLAWHPIGY LLCSGSNDHT
401: TKFWCRNRPA DNPRDVLMQN QGYNEQGFGR QPDNFQPSEA SPIPGAFVPG LTRNEGTIPG IGIAMPFDAS SQGDHKQPLP GSMALGAPPL PPGPHPSLLG
501: SGQQQGYQQQ QQHQGHPQQM LPMPNMPHHQ LPPSSHMPLH PHHLPRPMQM PPHGHMPPPS MPMSHQMPGS MGMQGGMNPQ MSQSHFMGAP SGVFQGQPNS
601: GGPQMYPQGR GGFNRPQMIP GYNNPFQQQQ QPPLPPGPPP NNNQQHQ

Arabidopsis Description

FYTransducin/WD40 repeat-like superfamily protein [Source:TAIR;Acc:AT5G13480]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.