Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04226 | Sorghum | nucleus | 81.98 | 32.49 |
| Zm00001d042091_P002 | Maize | cytosol, mitochondrion, nucleus, peroxisome, plastid | 81.27 | 32.03 |
| HORVU5Hr1G077690.1 | Barley | cytosol, mitochondrion, plastid, vacuole | 82.69 | 31.08 |
| TraesCS5B01G292800.1 | Wheat | nucleus | 74.2 | 29.45 |
| TraesCS5D01G300900.1 | Wheat | nucleus | 73.85 | 29.31 |
| TraesCS5A01G293600.2 | Wheat | nucleus | 73.5 | 29.25 |
| GSMUA_Achr4P29380_001 | Banana | nucleus | 59.01 | 23.49 |
| VIT_13s0019g00220.t01 | Wine grape | nucleus | 55.48 | 20.31 |
| KRH13395 | Soybean | nucleus | 49.82 | 19.75 |
| Solyc08g067040.2.1 | Tomato | nucleus | 52.3 | 19.37 |
| KRH20750 | Soybean | nucleus | 48.41 | 19.13 |
| CDX70506 | Canola | nucleus | 42.4 | 19.08 |
| Bra006202.1-P | Field mustard | nucleus | 42.76 | 18.28 |
| CDX78524 | Canola | nucleus | 43.11 | 18.26 |
| AT5G13480.2 | Thale cress | nucleus | 41.7 | 17.96 |
| CDX91118 | Canola | nucleus | 40.64 | 17.86 |
| Bra023416.1-P | Field mustard | nucleus | 39.58 | 17.31 |
| CDX85646 | Canola | nucleus | 39.22 | 17.16 |
| Os01t0531300-00 | Rice | endoplasmic reticulum, extracellular | 4.24 | 5.41 |
| Os04t0677700-00 | Rice | cytosol | 5.65 | 1.8 |
| Os10t0494800-01 | Rice | cytosol | 4.95 | 1.6 |
| Os01t0780400-02 | Rice | cytosol | 4.59 | 1.55 |
| Os07t0572000-01 | Rice | plastid | 1.06 | 0.89 |
| Os03t0339100-01 | Rice | nucleus | 1.41 | 0.85 |
| Os03t0725400-02 | Rice | cytosol | 0.71 | 0.62 |
| Os10t0104500-01 | Rice | cytosol | 0.71 | 0.42 |
| Os11t0594200-01 | Rice | cytosol | 0.71 | 0.42 |
| Os02t0543400-01 | Rice | cytosol, mitochondrion | 0.35 | 0.33 |
| Os06t0653800-01 | Rice | nucleus | 0.35 | 0.29 |
| Os03t0685600-01 | Rice | cytosol | 0.35 | 0.25 |
| Os03t0746600-01 | Rice | nucleus | 0.35 | 0.2 |
| CDY01533 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A0P0VCW9 | ProteinID:BAS76240.1 | GO:GO:0000003 | GO:GO:0001700 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005847 | GO:GO:0006139 |
| GO:GO:0006378 | GO:GO:0006379 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009790 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0009987 | GO:GO:0031124 | EnsemblPlantsGene:Os01g0951000 |
| EnsemblPlants:Os01t0951000-02 | PANTHER:PTHR22836 | UniParc:UPI0003938FAA | SEG:seg | : | : |
Description
OsWD40-32, OsFY, FYConserved hypothetical protein. (Os01t0951000-01);Similar to WD-repeat protein 33. (Os01t0951000-02)
Coordinates
chr1:-:41874009..41875650
Molecular Weight (calculated)
29972.1 Da
IEP (calculated)
9.873
GRAVY (calculated)
-0.842
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: FWCRNRPGDL TRDKYNSGQM QGYGDQHPAF AGRAMGGFQM PEPSTTPGPF NTGLSRNEGT IPGIGVAMPL DGSDHGEQRP SIPGLPPGQP PLPPGPHPSL
101: LAGGQQQQYQ QMQQQHPQFP RPPPPNMPQL QPPAHMLPHA QGSRAPLPQL PSMSGPPPVN PPLPPMPHPM AMQVQGSSNQ MMPQMPQHLI GMNQTHQGPP
201: SNMPPMGGFP NGMGNIQGGS SASGMQNFPM GGMYNRPQGK MPPQAQAQMT SIPGLSSYQP GMGNVGLPPP PPQHPPPRGS APQ
101: LAGGQQQQYQ QMQQQHPQFP RPPPPNMPQL QPPAHMLPHA QGSRAPLPQL PSMSGPPPVN PPLPPMPHPM AMQVQGSSNQ MMPQMPQHLI GMNQTHQGPP
201: SNMPPMGGFP NGMGNIQGGS SASGMQNFPM GGMYNRPQGK MPPQAQAQMT SIPGLSSYQP GMGNVGLPPP PPQHPPPRGS APQ
001: MPQPPMMRQS SASSTNINPD YHHPSGPFDP NVDSFGAKRM RKHTQRRAVD YTSTVVRYIQ ARTWQRDSRD RTTLQPTPAA AVDMLPTVAY SDNPSTSFAA
101: KFVHASLNKN RCSINRVLWT PSGRRLITGS QSGEFTLWNG QSFNFEMILQ AHDQPIRSMV WSHNENYMVS GDDGGTLKYW QNNMNNVKAN KTAHKESIRD
201: LSFCKTDLKF CSCSDDTTVK VWDFTKCVDE SSLTGHGWDV KSVDWHPTKS LLVSGGKDQL VKLWDTRSGR ELCSLHGHKN IVLSVKWNQN GNWLLTASKD
301: QIIKLYDIRT MKELQSFRGH TKDVTSLAWH PCHEEYFVSG SSDGSICHWI VGHENPQIEI PNAHDNSVWD LAWHPIGYLL CSGSNDHTTK FWCRNRPADN
401: PRDVLMQNQG YNEQGFGRQP DNFQPSEASP IPGAFVPGLT RNEGTIPGIG IAMPFDASSQ GDHKQPLPGS MALGAPPLPP GPHPSLLGSG QQQGYQQQQQ
501: HQGHPQQMLP MPNMPHHQLP PSSHMPLHPH HLPRPMQMPP HGHMPPPSMP MSHQMPGSMG MQGGMNPQMS QSHFMGAPSG VFQGQPNSGG PQMYPQGRGG
601: FNRPQMIPGY NNPFQQVPFK H
101: KFVHASLNKN RCSINRVLWT PSGRRLITGS QSGEFTLWNG QSFNFEMILQ AHDQPIRSMV WSHNENYMVS GDDGGTLKYW QNNMNNVKAN KTAHKESIRD
201: LSFCKTDLKF CSCSDDTTVK VWDFTKCVDE SSLTGHGWDV KSVDWHPTKS LLVSGGKDQL VKLWDTRSGR ELCSLHGHKN IVLSVKWNQN GNWLLTASKD
301: QIIKLYDIRT MKELQSFRGH TKDVTSLAWH PCHEEYFVSG SSDGSICHWI VGHENPQIEI PNAHDNSVWD LAWHPIGYLL CSGSNDHTTK FWCRNRPADN
401: PRDVLMQNQG YNEQGFGRQP DNFQPSEASP IPGAFVPGLT RNEGTIPGIG IAMPFDASSQ GDHKQPLPGS MALGAPPLPP GPHPSLLGSG QQQGYQQQQQ
501: HQGHPQQMLP MPNMPHHQLP PSSHMPLHPH HLPRPMQMPP HGHMPPPSMP MSHQMPGSMG MQGGMNPQMS QSHFMGAPSG VFQGQPNSGG PQMYPQGRGG
601: FNRPQMIPGY NNPFQQVPFK H
Arabidopsis Description
FYTransducin/WD40 repeat-like superfamily protein [Source:TAIR;Acc:AT5G13480]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.