Factsheet for Os03t0746600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033994_P002	Maize	mitochondrion, nucleus	82.39	83.04
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	77.5	76.89
TraesCS5D01G394200.1	Wheat	cytosol	77.1	76.36
KXG37566	Sorghum	plastid	81.6	72.52
KRH57171	Soybean	cytosol	57.14	56.81
PGSC0003DMT400039207	Potato	cytosol	56.36	56.58
KRH03886	Soybean	nucleus	56.56	56.23
GSMUA_Achr2P06000_001	Banana	cytosol	52.05	56.12
GSMUA_Achr8P28660_001	Banana	cytosol	36.79	55.79
CDY05801	Canola	cytosol	54.4	55.38
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	10.18	55.32
AT5G50230.1	Thale cress	cytosol	54.6	54.81
Solyc03g111740.2.1	Tomato	cytosol	51.66	54.77
VIT_17s0000g09750.t01	Wine grape	cytosol	54.21	53.47
Bra037932.1-P	Field mustard	mitochondrion	54.21	48.17
CDY05802	Canola	mitochondrion	53.82	47.83
Os02t0543400-01	Rice	cytosol, mitochondrion	14.48	24.58
Os03t0725400-02	Rice	cytosol	14.09	22.22
Os07t0572000-01	Rice	plastid	14.48	21.89
Os06t0653800-01	Rice	nucleus	14.48	21.57
Os03t0685600-01	Rice	cytosol	12.33	15.99
Os11t0594200-01	Rice	cytosol	14.29	15.21
Os10t0104500-01	Rice	cytosol	14.09	15.0
Os03t0339100-01	Rice	nucleus	13.5	14.62
Os01t0780400-02	Rice	cytosol	13.11	8.0
Os10t0494800-01	Rice	cytosol	12.92	7.54
Os04t0677700-00	Rice	cytosol	12.52	7.19
Os01t0531300-00	Rice	endoplasmic reticulum, extracellular	0.59	1.35
Os01t0951000-02	Rice	cytosol, mitochondrion, nucleus	0.2	0.35

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EntrezGene:4334090	ProteinID:ABF98847.1	InterPro:Autophagy-rel_prot_16	ProteinID:BAF13165.1
ProteinID:BAS86359.1	ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000045	GO:GO:0000421	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os03g0746600	EnsemblPlants:Os03t0746600-01
PFAM:PF00400	PFAM:PF08614	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR19878	PANTHER:PTHR19878:SF8	UniProt:Q10CZ9	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0000DB4B12
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_015628234.1
SEG:seg	:	:	:	:	:

Description

OsWD40-91WD40 repeat-like domain containing protein. (Os03t0746600-01)

Coordinates

chr3:+:30689477..30692481

Molecular Weight (calculated)

56467.1 Da

IEP (calculated)

7.258

GRAVY (calculated)

-0.396

Length

511 amino acids

Sequence
(BLAST)

001: MTMVEAEAGK EAIRRALRSL RRRHLVEEGA HRPAIEALAR PFAAQAVEWK EKAEKHELEL QQCYKAQSRL SEQLVTEIEE GKASKALLKE KETLITTMQT
101: ELEQTREENT QLKQSLEEKT SALDLIIQEH QAVKAELEQA LTKQKVAEDE NRNLIDRWML EKMKDAERLN EANAMYEEMV LKLKSAGVGG IQHNALQEAD
201: GIIRRSEAGY MDIMETPIPS TCRITIRAHD GGCGSIIFQH NTDKLISGGQ DQTVKIWSAH TGALTSTLQG CLGSVNDLAV TNDNKFVIAA CSSNKLFVWE
301: VNGGRPRHTL TGHTKNVSSV DASWVKSCVL ASSSNDHTIK IWDLQSGFCK STIMSGSNAN SLAFIDGVTL CSGHRDGHLR LWDIRSAKCT SQTFAHLDVS
401: SVSVSRNRNF ILTSGKDNVH NLFDPRTMEV CGKFKAMGNR VVSSWGRPCI SPDENSIAAG ANDGSVYIWS RLKKDGVPTI LQGHSSSVVS SSWCGLGPLA
501: TADKHHIYIW T

Best Arabidopsis Sequence Match ( AT5G50230.1 )
(BLAST)

001: MVQEEKAMEA INDALRALRK RHLLEEGAHA PAISALSKPL ISQGSEWKEK TEKLETELQQ CYKAQSRLSE QLVIEVAESR TSKAILQEKE LLINDLQKEL
101: TQRREDCTRL QEELEEKTKT VDVLIAENLE IRSQLEEMTS RVQKAETENK MLIDRWMLQK MQDAERLNEA NDLYEEMLAK LKANGLETLA RQQVDGIVRR
201: NEDGTDHFVE STIPSTCANR IHAHEGGCGS IVFEYNSGTL FTGGQDRAVK MWDTNSGTLI KSLYGSLGNI LDMAVTHDNK SVIAATSSNN LFVWDVSSGR
301: VRHTLTGHTD KVCAVDVSKF SSRHVVSAAY DRTIKLWDLH KGYCTNTVLF TSNCNAICLS IDGLTVFSGH MDGNLRLWDI QTGKLLSEVA GHSSAVTSVS
401: LSRNGNRILT SGRDNVHNVF DTRTLEICGT LRASGNRLAS NWSRSCISPD DDYVAAGSAD GSVHVWSLSK GNIVSILKEQ TSPILCCSWS GIGKPLASAD
501: KNGYVCTWT

Arabidopsis Description

ATG16Autophagy-related protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.