CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69403	Canola	nucleus	36.06	97.84
AT5G50230.1	Thale cress	cytosol	90.64	89.39
Bra037932.1-P	Field mustard	mitochondrion	98.61	86.09
CDY05802	Canola	mitochondrion	98.61	86.09
KRH03886	Soybean	nucleus	73.71	71.98
KRH57171	Soybean	cytosol	73.31	71.6
PGSC0003DMT400039207	Potato	cytosol	70.72	69.74
Solyc03g111740.2.1	Tomato	cytosol	66.73	69.5
VIT_17s0000g09750.t01	Wine grape	cytosol	69.92	67.76
GSMUA_Achr8P28660_001	Banana	cytosol	42.63	63.5
GSMUA_Achr2P06000_001	Banana	cytosol	58.76	62.24
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	10.96	58.51
Os03t0746600-01	Rice	nucleus	55.38	54.4
Zm00001d033994_P002	Maize	mitochondrion, nucleus	53.78	53.25
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	51.79	50.49
TraesCS5D01G394200.1	Wheat	cytosol	51.79	50.39
KXG37566	Sorghum	plastid	53.19	46.43
CDX84544	Canola	cytosol	13.74	23.0
CDY08856	Canola	cytosol	13.55	22.9
CDX86957	Canola	cytosol	13.55	21.79
CDY00226	Canola	cytosol, nucleus, plastid	13.55	21.59
CDX77842	Canola	cytosol, nucleus, peroxisome	4.18	21.21
CDX67810	Canola	cytosol	14.94	20.89
CDY08014	Canola	mitochondrion	4.18	20.59
CDY54233	Canola	golgi	7.17	19.35
CDX91316	Canola	cytosol	12.55	19.33
CDX70436	Canola	plastid	6.37	19.16
CDX97287	Canola	cytosol	12.35	19.02
CDX79802	Canola	cytosol, golgi	15.54	18.8
CDY17912	Canola	cytosol, golgi	15.54	18.7
CDX96351	Canola	cytosol	14.54	18.3
CDX72834	Canola	cytosol	14.34	18.09
CDX68298	Canola	cytosol	13.74	17.74
CDY36678	Canola	cytosol	13.55	17.48
CDX98392	Canola	endoplasmic reticulum, extracellular	15.14	17.16
CDX70097	Canola	cytosol	15.34	16.67
CDX98931	Canola	nucleus	15.94	16.67
CDY52843	Canola	nucleus	7.37	15.95
CDY09645	Canola	cytosol	14.94	15.86
CDX84790	Canola	cytosol	14.94	15.76
CDY27046	Canola	cytosol	14.94	15.76
CDX96156	Canola	cytosol	14.94	15.76
CDY50395	Canola	cytosol, extracellular, golgi, mitochondrion	9.96	15.67
CDX72090	Canola	mitochondrion	9.96	14.97
CDY34965	Canola	cytosol	12.95	13.83
CDX90556	Canola	cytosol	13.15	13.72
CDY09730	Canola	cytosol	13.15	13.72
CDY28352	Canola	cytosol	12.75	13.42
CDY27174	Canola	cytosol	3.59	11.76
CDX70506	Canola	nucleus	14.14	11.29
CDX91118	Canola	nucleus	14.34	11.18
CDX85646	Canola	nucleus	14.14	10.97
CDY44171	Canola	cytosol	3.39	10.97
CDX78524	Canola	nucleus	14.34	10.78
CDY34658	Canola	mitochondrion	14.54	9.53
CDX88026	Canola	cytosol	14.74	8.93
CDX81101	Canola	cytosol	14.34	8.56
CDY60225	Canola	cytosol	14.14	8.5
CDX80363	Canola	cytosol	14.14	8.35
CDY34846	Canola	nucleus	14.54	8.0
CDY52222	Canola	cytosol	14.94	6.68
CDY03812	Canola	cytosol	14.94	6.68
CDY15006	Canola	cytosol	11.95	5.92
CDY01533	Canola	plastid	1.79	5.7

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:Autophagy-rel_prot_16	EnsemblPlants:CDY05801	ProteinID:CDY05801	ProteinID:CDY05801.1
ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00120888001
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PFAM:PF08614	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19878	PANTHER:PTHR19878:SF8	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0004EE5C76	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

BnaA10g06190D

Coordinates

chrLK031965:-:32934..35031

Molecular Weight (calculated)

55496.6 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.399

Length

502 amino acids

Sequence
(BLAST)

001: MEAIKDALRA LRQRHLLEEG AHGPAISALS KPMISQGSEW KEKTEKLEIE LQQCYKAQSR LSEQLVIEVA ESRTSKSSLQ DKELLINDLE KDLSQTREEC
101: TRLQQELEEK TKTLDLLITE NKEVRSQLEE MTNRAQKAES ENKMLIDRWM LQKMQDAERL NEANALYEEM LAKLKANGLE NLARQQVDGI VRRNEDGTDH
201: FVESTIPSTC GHRIHAHEGG CGSILFQYNS RTLFTGGQAG PVKMWDTNSG SLIKSLNGSL GNILDLAITH DNKSLIAASS SNNLFVWDVN SGRVRHTLTG
301: HTDKVCAVDV SKFSSRHVVS AAYDRTIKLW DLQKGYCTNT VLFTSNCNAI CLSIDGLTVF SGHMDGNLRL WDIQTAKLLS EVAGHSSAVT SVSLSRNGNM
401: ILTSGRDNVH NVFDTRTLEI CGTLRASGNR LASNWSRSCI SPDDEYVAAG SADGTVHVWS ISKGSIVSTL KEQTSPILCC SWSGIGKPLA SADKNGYVCT
501: WT

Best Arabidopsis Sequence Match ( AT5G50230.1 )
(BLAST)

001: MVQEEKAMEA INDALRALRK RHLLEEGAHA PAISALSKPL ISQGSEWKEK TEKLETELQQ CYKAQSRLSE QLVIEVAESR TSKAILQEKE LLINDLQKEL
101: TQRREDCTRL QEELEEKTKT VDVLIAENLE IRSQLEEMTS RVQKAETENK MLIDRWMLQK MQDAERLNEA NDLYEEMLAK LKANGLETLA RQQVDGIVRR
201: NEDGTDHFVE STIPSTCANR IHAHEGGCGS IVFEYNSGTL FTGGQDRAVK MWDTNSGTLI KSLYGSLGNI LDMAVTHDNK SVIAATSSNN LFVWDVSSGR
301: VRHTLTGHTD KVCAVDVSKF SSRHVVSAAY DRTIKLWDLH KGYCTNTVLF TSNCNAICLS IDGLTVFSGH MDGNLRLWDI QTGKLLSEVA GHSSAVTSVS
401: LSRNGNRILT SGRDNVHNVF DTRTLEICGT LRASGNRLAS NWSRSCISPD DDYVAAGSAD GSVHVWSLSK GNIVSILKEQ TSPILCCSWS GIGKPLASAD
501: KNGYVCTWT

Arabidopsis Description

ATG16Autophagy-related protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q6NNP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.