Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72090 | Canola | mitochondrion | 66.04 | 94.31 |
| CDY27174 | Canola | cytosol | 30.19 | 94.12 |
| CDY34965 | Canola | cytosol | 90.57 | 91.91 |
| CDY09730 | Canola | cytosol | 80.92 | 80.25 |
| CDX90556 | Canola | cytosol | 80.71 | 80.04 |
| AT3G16650.1 | Thale cress | cytosol | 80.08 | 79.75 |
| KRH12069 | Soybean | nucleus | 74.63 | 74.79 |
| KRH37088 | Soybean | nucleus | 74.42 | 74.42 |
| VIT_05s0077g02310.t01 | Wine grape | cytosol | 74.42 | 73.35 |
| CDY44171 | Canola | cytosol | 23.69 | 72.9 |
| CDY08856 | Canola | cytosol | 14.05 | 22.56 |
| CDX84544 | Canola | cytosol | 14.05 | 22.33 |
| CDX97287 | Canola | cytosol | 14.05 | 20.55 |
| CDX91316 | Canola | cytosol | 14.05 | 20.55 |
| CDX70436 | Canola | plastid | 7.13 | 20.36 |
| CDX86957 | Canola | cytosol | 13.0 | 19.87 |
| CDY00226 | Canola | cytosol, nucleus, plastid | 13.0 | 19.68 |
| CDY54233 | Canola | golgi | 7.34 | 18.82 |
| CDY52843 | Canola | nucleus | 9.01 | 18.53 |
| CDX77842 | Canola | cytosol, nucleus, peroxisome | 3.56 | 17.17 |
| CDX67810 | Canola | cytosol | 12.79 | 16.99 |
| CDY08014 | Canola | mitochondrion | 3.56 | 16.67 |
| CDY09645 | Canola | cytosol | 16.35 | 16.49 |
| CDX72834 | Canola | cytosol | 13.0 | 15.58 |
| CDX96351 | Canola | cytosol | 12.79 | 15.29 |
| CDY27046 | Canola | cytosol | 15.09 | 15.13 |
| CDX84790 | Canola | cytosol | 15.09 | 15.13 |
| CDY50395 | Canola | cytosol, extracellular, golgi, mitochondrion | 10.06 | 15.05 |
| CDX79802 | Canola | cytosol, golgi | 13.0 | 14.94 |
| CDX70097 | Canola | cytosol | 14.47 | 14.94 |
| CDX96156 | Canola | cytosol | 14.88 | 14.92 |
| CDY17912 | Canola | cytosol, golgi | 13.0 | 14.87 |
| CDX98931 | Canola | nucleus | 14.88 | 14.79 |
| CDX68298 | Canola | cytosol | 11.32 | 13.88 |
| CDX98392 | Canola | endoplasmic reticulum, extracellular | 12.79 | 13.77 |
| CDY36678 | Canola | cytosol | 11.11 | 13.62 |
| CDY05801 | Canola | cytosol | 13.42 | 12.75 |
| CDX70506 | Canola | nucleus | 15.09 | 11.45 |
| CDX91118 | Canola | nucleus | 15.09 | 11.18 |
| CDY05802 | Canola | mitochondrion | 13.42 | 11.13 |
| CDX85646 | Canola | nucleus | 14.88 | 10.97 |
| CDX78524 | Canola | nucleus | 15.09 | 10.78 |
| CDY34658 | Canola | mitochondrion | 15.72 | 9.79 |
| CDX88026 | Canola | cytosol | 14.68 | 8.44 |
| CDX81101 | Canola | cytosol | 14.88 | 8.44 |
| CDY60225 | Canola | cytosol | 14.47 | 8.26 |
| CDY34846 | Canola | nucleus | 15.51 | 8.11 |
| CDX80363 | Canola | cytosol | 14.05 | 7.88 |
| CDY52222 | Canola | cytosol | 16.56 | 7.04 |
| CDY03812 | Canola | cytosol | 16.56 | 7.03 |
| CDY15006 | Canola | cytosol | 13.84 | 6.51 |
| CDY69403 | Canola | nucleus | 2.52 | 6.49 |
| CDY01533 | Canola | plastid | 1.89 | 5.7 |
Protein Annotations
| MapMan:16.4.5.1.3 | Gene3D:2.130.10.10 | UniProt:A0A078GT91 | EnsemblPlants:CDY28352 | ProteinID:CDY28352 | ProteinID:CDY28352.1 |
| InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00040138001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR19923 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004EE9B41 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : |
Description
BnaC01g35220DBnaC01g35220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT91]
Coordinates
chrLK032218:-:118065..121634
Molecular Weight (calculated)
53171.0 Da
IEP (calculated)
9.029
GRAVY (calculated)
-0.446
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEIEPQSL QKMNLKSVKR ALDLFSPARD QIAPPDPESK KVRLSHKIQV AFGGVEPVST QHIRKSDHNN EQIAPSIALP CTEGVQKGVT EKALAVVGPA
101: LPPRTLNDNT VHAGKSTTVL PAFGSSSERF SSWNLSTSAL MERIPSRWPR PEWHAPWKNY RVIQGHLGWV RSVAFDSSNE WFCTGSAYRT IKVWDVASGV
201: LKLTLTGHIG QVRGLAVSNK DTYMFSAGDD KQVKCWDLEQ NKVIRSYHGH LSGVYCLAFH PTLDVVLTGG RDSVCRVWDI RTNKQMFALS GHDKDVCSVF
301: THPTDPQVVT GSHDSTIKFW DLRYGRTMAT LTNHKKAVRA MALHPKENAF VSASADNIKK FSLPKGEFRH NMLSQQRATI NAVAVNEDGV MVTGGDNGSL
401: WFWDWKSGHS FQQAETIVQP GSLESEAGIY AACYDQTGSR LVTCEADKTI KMWKEDESAT PETHPLNFRP PKEIRRF
101: LPPRTLNDNT VHAGKSTTVL PAFGSSSERF SSWNLSTSAL MERIPSRWPR PEWHAPWKNY RVIQGHLGWV RSVAFDSSNE WFCTGSAYRT IKVWDVASGV
201: LKLTLTGHIG QVRGLAVSNK DTYMFSAGDD KQVKCWDLEQ NKVIRSYHGH LSGVYCLAFH PTLDVVLTGG RDSVCRVWDI RTNKQMFALS GHDKDVCSVF
301: THPTDPQVVT GSHDSTIKFW DLRYGRTMAT LTNHKKAVRA MALHPKENAF VSASADNIKK FSLPKGEFRH NMLSQQRATI NAVAVNEDGV MVTGGDNGSL
401: WFWDWKSGHS FQQAETIVQP GSLESEAGIY AACYDQTGSR LVTCEADKTI KMWKEDESAT PETHPLNFRP PKEIRRF
001: MTMIALNREV ETQSLKKLSL KSVRRAREIF SPVHGQFPQP DPESKRIRLC HKIQVAFGGV EPASKPTRIA DHNSEKTAPL KALALPGPKG SKELRKSATE
101: KALVVGPTLP PRDLNNTGNP GKSTAILPAP GSFSERNLST AALMERMPSR WPRPEWHAPW KNYRVLQGHL GWVRSVAFDP SNEWFCTGSA DRTIKIWDVA
201: TGVLKLTLTG HIGQVRGLAV SNRHTYMFSA GDDKQVKCWD LEQNKVIRSY HGHLHGVYCL ALHPTLDVVL TGGRDSVCRV WDIRTKMQIF VLPHDSDVFS
301: VLARPTDPQV ITGSHDSTIK FWDLRYGKSM ATITNHKKTV RAMALHPKEN DFVSASADNI KKFSLPKGEF CHNMLSLQRD IINAVAVNED GVMVTGGDKG
401: GLWFWDWKSG HNFQRAETIV QPGSLESEAG IYAACYDQTG SRLVTCEGDK TIKMWKEDED ATPETHPLNF KPPKEIRRF
101: KALVVGPTLP PRDLNNTGNP GKSTAILPAP GSFSERNLST AALMERMPSR WPRPEWHAPW KNYRVLQGHL GWVRSVAFDP SNEWFCTGSA DRTIKIWDVA
201: TGVLKLTLTG HIGQVRGLAV SNRHTYMFSA GDDKQVKCWD LEQNKVIRSY HGHLHGVYCL ALHPTLDVVL TGGRDSVCRV WDIRTKMQIF VLPHDSDVFS
301: VLARPTDPQV ITGSHDSTIK FWDLRYGKSM ATITNHKKTV RAMALHPKEN DFVSASADNI KKFSLPKGEF CHNMLSLQRD IINAVAVNED GVMVTGGDKG
401: GLWFWDWKSG HNFQRAETIV QPGSLESEAG IYAACYDQTG SRLVTCEGDK TIKMWKEDED ATPETHPLNF KPPKEIRRF
Arabidopsis Description
PRL2Protein pleiotropic regulator PRL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39190]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.