Factsheet for Zm00001d033309_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005108_P003
Zm00001d008345_P003
Zm00001d009745_P023
Zm00001d010811_P002
Zm00001d013116_P002
Zm00001d017254_P002
Zm00001d034361_P001
Zm00001d038745_P002
Zm00001d039165_P046
Zm00001d039321_P008
Zm00001d040274_P001
Zm00001d042287_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G15900.1	Zm00001d042287_P001	AT1G09770.1	17575050
AT4G15900.1	Zm00001d005108_P003	AT3G29160.1	10220464
AT4G15900.1	Zm00001d010811_P002	AT3G29160.1	10220464
AT4G15900.1	Zm00001d038745_P002	AT3G29160.1	10220464
AT4G15900.1	Zm00001d008345_P003	AT4G02150.1	9765207
AT4G15900.1	Zm00001d040274_P001	AT4G02150.1	9765207
AT4G15900.1	Zm00001d009745_P023	AT4G05420.1	18223036
AT4G15900.1	Zm00001d039165_P046	AT4G05420.1	18223036
AT4G15900.1	Zm00001d013116_P002	AT5G46210.1	18223036
AT4G15900.1	Zm00001d034361_P001	AT5G46210.1	18223036
AT4G15900.1	Zm00001d017254_P002	AT5G58720.1	10220464
AT4G15900.1	Zm00001d039321_P008	AT5G58720.1	10220464

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25821	Sorghum	cytosol	95.24	96.03
Os03t0339100-01	Rice	nucleus	89.65	91.74
GSMUA_Achr8P10200_001	Banana	cytosol	16.56	89.89
GSMUA_Achr8P10210_001	Banana	cytosol	17.6	89.47
TraesCS3D01G181100.1	Wheat	cytosol	88.61	89.35
TraesCS3B01G205300.1	Wheat	cytosol	88.2	88.94
TraesCS3A01G175600.2	Wheat	plastid	87.37	88.28
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome, plastid	79.3	78.81
HORVU3Hr1G035450.7	Barley	mitochondrion	82.82	78.12
CDY27174	Canola	cytosol	24.43	77.12
KRH12069	Soybean	nucleus	74.53	75.63
KRH37088	Soybean	nucleus	74.33	75.26
VIT_05s0077g02310.t01	Wine grape	cytosol	74.12	73.97
Bra012753.1-P	Field mustard	cytosol	72.67	72.97
PGSC0003DMT400023040	Potato	mitochondrion	45.96	72.31
AT4G15900.1	Thale cress	cytosol	71.84	71.4
Bra007287.1-P	Field mustard	cytosol	57.56	69.5
CDY44171	Canola	cytosol	21.95	68.39
AT3G16650.1	Thale cress	cytosol	65.84	66.39
Bra021188.1-P	Field mustard	cytosol	66.67	64.79
GSMUA_Achr8P10190_001	Banana	cytosol, plastid	35.61	62.32
Solyc09g010620.1.1	Tomato	cytosol	20.91	61.96
Zm00001d033849_P002	Maize	extracellular, nucleus	14.91	22.57
Zm00001d021866_P001	Maize	plastid	14.91	21.95
Zm00001d050708_P002	Maize	cytosol	13.66	21.78
Zm00001d021868_P001	Maize	plastid	14.7	21.65
Zm00001d046930_P001	Maize	cytosol, extracellular, plasma membrane	13.46	19.94
Zm00001d036709_P001	Maize	cytosol	13.04	19.33
Zm00001d039211_P006	Maize	cytosol	18.01	17.5
Zm00001d041945_P003	Maize	cytosol	14.91	16.94
Zm00001d011779_P005	Maize	cytosol	15.11	14.9
Zm00001d033994_P002	Maize	mitochondrion, nucleus	14.08	13.41
Zm00001d033713_P002	Maize	cytosol, extracellular, plastid	11.59	11.18
Zm00001d042091_P002	Maize	cytosol, mitochondrion, nucleus, peroxisome, plastid	15.32	10.31
Zm00001d012620_P025	Maize	cytosol	16.36	9.47
Zm00001d032598_P023	Maize	cytosol, plasma membrane, plastid	15.53	8.13
Zm00001d001828_P033	Maize	cytosol	15.32	8.03
Zm00001d026621_P006	Maize	cytosol	14.91	7.91

Protein Annotations

MapMan:16.4.5.1.3	Gene3D:2.130.10.10	UniProt:A0A1D6KXM9	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	ProteinID:ONM07205.1	PFAM:PF00400
PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19923	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI00084580C0	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d033309	EnsemblPlants:Zm00001d033309_P003	EnsemblPlants:Zm00001d033309_T003	SEG:seg	:

Description

Protein pleiotropic regulatory locus 1

Coordinates

chr1:-:258364610..258374531

Molecular Weight (calculated)

53113.2 Da

IEP (calculated)

9.346

GRAVY (calculated)

-0.399

Length

483 amino acids

Sequence
(BLAST)

001: MATAAADGPP VEPQSLKKLS LRSLKRSLDL FAPAHALLFT PDAESKRIRT GCKVSAEYGA VKDLTPEQGR GGQGKGPAPP SSTALALPGT QDTKDAHGEG
101: SRNAIVPAPL MLPKAPESTI PGKNTTLSIP GSSDRFSTSA LMERIPSRWP RPTWHAPWKN YRVISGHLGW VRSIAFDPAN EWFCTGSADR TIKIWDLASG
201: TLKLTLTGHI EQIRGLAVSQ RHTYLFSAGD DKQVKCWDLE QNKVIRSYHG HLSGVYCLAL HPTIDILLTG GRDSVCRVWD IRTKAHVSAL TGHDNTVCSV
301: FARPTDPQVV TGSHDTTIKF WDLVAGRTMC TLTHHKKSVR AMALHPKDNP FFRKAFASAS ADNVKKFNLP KGEFLHNMLS QQKTIINSMA VNEDGVLATG
401: GDNGSLWFWD WKSGHNFQQD QTIVQPGSLE SEACIYALSY DVSGSRLVSC EADKTIKMWK EDLTATPETH PINFKPPKDI RRY

Best Arabidopsis Sequence Match ( AT4G15900.1 )
(BLAST)

001: MPAPTTEIEP IEAQSLKKLS LKSLKRSLEL FSPVHGQFPP PDPEAKQIRL SHKMKVAFGG VEPVVSQPPR QPDRINEQPG PSNALSLAAP EGSKSTQKGA
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF

Arabidopsis Description

PRL1Protein pleiotropic regulatory locus 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42384]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.