Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G181100.1 | Wheat | cytosol | 98.95 | 98.75 |
| TraesCS3B01G205300.1 | Wheat | cytosol | 98.12 | 97.91 |
| GSMUA_Achr8P10210_001 | Banana | cytosol | 17.99 | 90.53 |
| GSMUA_Achr8P10200_001 | Banana | cytosol | 16.74 | 89.89 |
| Os03t0339100-01 | Rice | nucleus | 88.7 | 89.83 |
| KXG25821 | Sorghum | cytosol | 89.12 | 88.94 |
| Zm00001d033309_P003 | Maize | cytosol | 88.28 | 87.37 |
| HORVU3Hr1G035450.7 | Barley | mitochondrion | 91.21 | 85.16 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 79.92 | 78.6 |
| CDY27174 | Canola | cytosol | 24.69 | 77.12 |
| KRH12069 | Soybean | nucleus | 75.73 | 76.05 |
| KRH37088 | Soybean | nucleus | 75.1 | 75.26 |
| VIT_05s0077g02310.t01 | Wine grape | cytosol | 76.15 | 75.21 |
| Bra012753.1-P | Field mustard | cytosol | 74.06 | 73.6 |
| AT4G15900.1 | Thale cress | cytosol | 73.43 | 72.22 |
| PGSC0003DMT400023040 | Potato | mitochondrion | 46.03 | 71.66 |
| Bra007287.1-P | Field mustard | cytosol | 58.16 | 69.5 |
| AT3G16650.1 | Thale cress | cytosol | 68.62 | 68.48 |
| CDY44171 | Canola | cytosol | 21.97 | 67.74 |
| Bra021188.1-P | Field mustard | cytosol | 67.15 | 64.59 |
| Solyc09g010620.1.1 | Tomato | cytosol | 21.55 | 63.19 |
| GSMUA_Achr8P10190_001 | Banana | cytosol, plastid | 34.94 | 60.51 |
| TraesCS4A01G258000.1 | Wheat | cytosol | 15.9 | 23.53 |
| TraesCS6A01G250200.1 | Wheat | cytosol | 14.44 | 23.0 |
| TraesCS2A01G196900.1 | Wheat | plastid | 15.27 | 22.05 |
| TraesCS1A01G358200.1 | Wheat | cytoskeleton, cytosol, nucleus | 9.62 | 20.91 |
| TraesCS2A01G126700.2 | Wheat | cytoskeleton, cytosol, nucleus | 15.48 | 18.64 |
| TraesCS7A01G499900.1 | Wheat | nucleus | 13.39 | 18.5 |
| TraesCS1A01G443600.1 | Wheat | cytosol | 17.78 | 17.89 |
| TraesCS5A01G293600.2 | Wheat | nucleus | 14.64 | 9.85 |
| TraesCS3A01G317500.1 | Wheat | cytosol | 16.11 | 9.27 |
| TraesCS1A01G164300.1 | Wheat | cytosol | 15.48 | 9.09 |
| TraesCS2A01G592600.1 | Wheat | cytosol | 15.48 | 8.0 |
Protein Annotations
| MapMan:16.4.5.1.3 | Gene3D:2.130.10.10 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19923 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS3A01G175600 |
| EnsemblPlants:TraesCS3A01G175600.2 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| TIGR:cd00200 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:195456859..195461774
Molecular Weight (calculated)
52591.7 Da
IEP (calculated)
9.199
GRAVY (calculated)
-0.368
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAASAGG EPVEPQSLKK LSLKSLRRSL DLFAPTHSLP FAPDAESKRI RVSCKVNAEY GAVKNLPTDQ DRAQGKGAAA PSNALALLGT QDTKDAPREG
101: TSNAIIPAPL MLPKAPESAV PGKNTTVLSV PGSSDRFSTS ALMERLPSRW PKPVWHAPWK NYRVISGHLG WVRSIAFDPG NEWFCTGSAD RTIKIWDLAS
201: GMLKLTLTGH IEQVRLAVSQ RHTYLFSAGD DKQVKCWDLE QNKVIRSYHG HLSGVYCLAL HPTIDVLLTG GRDSVCRVWD IRTKAHVSAL TGHDNTVCSV
301: FARPTDPQVV TGSHDTTIKF WDLVAGKTMC TLTHHKKSVR AMALHPKEKS FASASADNIK KWSLPKGEFL HNMLSQQKTI LNAMAVNEDG VLATAGDNGS
401: MWFWDWKSGH NFQQEQTIVQ PGSLESEACI YALSYDNSGS RLVTCEADKT IKMWKEDLTA TPETHPVNFK PPKDIRRY
101: TSNAIIPAPL MLPKAPESAV PGKNTTVLSV PGSSDRFSTS ALMERLPSRW PKPVWHAPWK NYRVISGHLG WVRSIAFDPG NEWFCTGSAD RTIKIWDLAS
201: GMLKLTLTGH IEQVRLAVSQ RHTYLFSAGD DKQVKCWDLE QNKVIRSYHG HLSGVYCLAL HPTIDVLLTG GRDSVCRVWD IRTKAHVSAL TGHDNTVCSV
301: FARPTDPQVV TGSHDTTIKF WDLVAGKTMC TLTHHKKSVR AMALHPKEKS FASASADNIK KWSLPKGEFL HNMLSQQKTI LNAMAVNEDG VLATAGDNGS
401: MWFWDWKSGH NFQQEQTIVQ PGSLESEACI YALSYDNSGS RLVTCEADKT IKMWKEDLTA TPETHPVNFK PPKDIRRY
001: MPAPTTEIEP IEAQSLKKLS LKSLKRSLEL FSPVHGQFPP PDPEAKQIRL SHKMKVAFGG VEPVVSQPPR QPDRINEQPG PSNALSLAAP EGSKSTQKGA
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF
Arabidopsis Description
PRL1Protein pleiotropic regulatory locus 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42384]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.