Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21073 | Soybean | cytosol | 37.13 | 92.31 |
| TraesCS5B01G427400.1 | Wheat | cytosol | 99.72 | 88.29 |
| TraesCS5D01G433700.3 | Wheat | cytosol, plastid | 99.72 | 85.42 |
| HORVU5Hr1G103580.2 | Barley | plastid | 99.72 | 85.11 |
| EER93338 | Sorghum | plastid | 93.67 | 79.86 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 93.11 | 79.57 |
| Zm00001d013116_P002 | Maize | plastid | 93.25 | 77.09 |
| KRH58640 | Soybean | cytosol | 82.98 | 76.13 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 85.65 | 75.84 |
| KRH11182 | Soybean | cytosol, plastid | 83.83 | 75.63 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 82.98 | 75.16 |
| KRH42547 | Soybean | cytosol | 81.15 | 75.03 |
| CDY33461 | Canola | cytosol | 79.89 | 74.64 |
| Bra025031.1-P | Field mustard | cytosol | 79.75 | 74.61 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 83.83 | 74.31 |
| CDX77644 | Canola | cytosol | 80.03 | 74.19 |
| CDY43957 | Canola | cytosol | 79.32 | 72.68 |
| Bra022023.1-P | Field mustard | plastid | 79.89 | 72.36 |
| CDY35152 | Canola | plastid | 79.89 | 72.26 |
| CDX87735 | Canola | cytosol | 79.18 | 72.18 |
| Bra017569.1-P | Field mustard | plastid | 79.75 | 72.14 |
| CDY03235 | Canola | plastid | 79.89 | 71.9 |
| AT5G46210.1 | Thale cress | cytosol | 79.47 | 71.34 |
| Solyc02g070460.2.1 | Tomato | plastid | 79.75 | 70.7 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 84.67 | 68.8 |
| KRH21072 | Soybean | plastid | 43.32 | 63.77 |
| TraesCS6A01G306600.1 | Wheat | cytosol | 41.49 | 40.08 |
| TraesCS2A01G520700.1 | Wheat | cytosol | 40.23 | 39.07 |
| TraesCS1A01G090000.1 | Wheat | cytosol | 33.61 | 32.12 |
| TraesCS1A01G089900.1 | Wheat | cytosol, golgi | 33.33 | 31.77 |
| TraesCS3A01G039000.1 | Wheat | cytosol | 29.25 | 29.21 |
| TraesCS3A01G457400.1 | Wheat | cytosol | 6.75 | 16.0 |
Protein Annotations
Description
No Description!
Coordinates
chr5A:+:610483101..610489244
Molecular Weight (calculated)
82049.6 Da
IEP (calculated)
7.340
GRAVY (calculated)
-0.306
Length
711 amino acids
Sequence
(BLAST)
(BLAST)
001: IGQPKLPKNF EEDTWAILKD AITAIFLKQK LSCDVEKLYQ AAGDLCLHKL GANLYERVKK ECEIHISAKI SALVGQSPDL VVFLSLVQRT WQDFCDQMLI
101: IRGIALLLDV KYVKNVANLS SVWDMGLQLF RKHISLSPEI EHKTVTGLLR LIESERLGEA IDKTLLSHLL KMFTDLGMYS ETFEKPFLEC TSEFYATEGV
201: KYLQQSDIPD YLKHAESRLQ EEHDRCILYL EANTRKPLIA TTEKQLLQRH TSAIIEKGFT VLMEANRVTD LSRMYTLFQR VDAIEMLKQA LSLYIRGTGQ
301: GIIMDEEKDK DLVPFLLEFK ASLDKILEES FAKNEAFSNT IKESFEHLIN LRQNRPAELI AKFLDEKLRA GNKGTSEEEL EGILDKVLVL FRFIQGKDVF
401: EAFYKKDLAK RLLLGKSASI DAEKSMITKL KTECGSQFTN KLEGMFKDIE LSKEINDSFK QSSQARTKLP TGIEMSVHVL TTGYWPTYPP MDVKLPHELN
501: VYQDIFKEFY LSKYSGRRLM WQNSLGHCVL KVEFPKGRKE LAVSLFQSVV LMLFNDAQKL SFVDIKESTG IEDKELRRTL QSLACGKVRV LQKTPKGRDI
601: DDKDEFVFNE DFSAPLYRIK VNAIQMKETV EENTSTTERV FQDRQYQVDA AIVRIMKTRK TLSHTLLITE LFQQLKFPIK PADMKKRIES LIDREYLERD
701: RSNPQIYNYL A
101: IRGIALLLDV KYVKNVANLS SVWDMGLQLF RKHISLSPEI EHKTVTGLLR LIESERLGEA IDKTLLSHLL KMFTDLGMYS ETFEKPFLEC TSEFYATEGV
201: KYLQQSDIPD YLKHAESRLQ EEHDRCILYL EANTRKPLIA TTEKQLLQRH TSAIIEKGFT VLMEANRVTD LSRMYTLFQR VDAIEMLKQA LSLYIRGTGQ
301: GIIMDEEKDK DLVPFLLEFK ASLDKILEES FAKNEAFSNT IKESFEHLIN LRQNRPAELI AKFLDEKLRA GNKGTSEEEL EGILDKVLVL FRFIQGKDVF
401: EAFYKKDLAK RLLLGKSASI DAEKSMITKL KTECGSQFTN KLEGMFKDIE LSKEINDSFK QSSQARTKLP TGIEMSVHVL TTGYWPTYPP MDVKLPHELN
501: VYQDIFKEFY LSKYSGRRLM WQNSLGHCVL KVEFPKGRKE LAVSLFQSVV LMLFNDAQKL SFVDIKESTG IEDKELRRTL QSLACGKVRV LQKTPKGRDI
601: DDKDEFVFNE DFSAPLYRIK VNAIQMKETV EENTSTTERV FQDRQYQVDA AIVRIMKTRK TLSHTLLITE LFQQLKFPIK PADMKKRIES LIDREYLERD
701: RSNPQIYNYL A
001: MSLPTKRSTF SAASASDDSS YSSPPMKKAK NDLHHSPQHP NTADKVVGFH MEEDPTPAAA NLSRKKATLP QPTKKFVIKL NKAKPTLPTN FEENTWEKLQ
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
Arabidopsis Description
CUL4Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.