Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42547 | Soybean | cytosol | 94.84 | 95.58 |
| KRH21073 | Soybean | cytosol | 35.23 | 95.45 |
| KRH11182 | Soybean | cytosol, plastid | 90.45 | 88.96 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 86.58 | 85.48 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 88.26 | 85.29 |
| KRH21072 | Soybean | plastid | 52.52 | 84.27 |
| CDY33461 | Canola | cytosol | 81.55 | 83.05 |
| TraesCS5A01G425300.1 | Wheat | cytosol | 76.13 | 82.98 |
| Bra025031.1-P | Field mustard | cytosol | 81.16 | 82.76 |
| CDX77644 | Canola | cytosol | 81.29 | 82.14 |
| CDY43957 | Canola | cytosol | 81.29 | 81.19 |
| Bra022023.1-P | Field mustard | plastid | 81.81 | 80.76 |
| CDX87735 | Canola | cytosol | 81.03 | 80.51 |
| CDY35152 | Canola | plastid | 81.42 | 80.28 |
| Bra017569.1-P | Field mustard | plastid | 81.29 | 80.15 |
| CDY03235 | Canola | plastid | 81.29 | 79.75 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 82.45 | 79.58 |
| Solyc02g070460.2.1 | Tomato | plastid | 82.32 | 79.55 |
| AT5G46210.1 | Thale cress | cytosol | 81.16 | 79.42 |
| TraesCS5B01G427400.1 | Wheat | cytosol | 79.35 | 76.59 |
| EER93338 | Sorghum | plastid | 80.77 | 75.06 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 80.26 | 74.76 |
| TraesCS5D01G433700.3 | Wheat | cytosol, plastid | 79.87 | 74.58 |
| HORVU5Hr1G103580.2 | Barley | plastid | 80.0 | 74.43 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 81.81 | 72.46 |
| Zm00001d013116_P002 | Maize | plastid | 80.26 | 72.33 |
| KRH45896 | Soybean | cytosol | 39.35 | 41.67 |
| KRG93520 | Soybean | cytosol | 39.23 | 41.47 |
| KRG99095 | Soybean | cytosol | 39.1 | 41.39 |
| KRH18483 | Soybean | cytosol | 38.97 | 41.2 |
| KRH70713 | Soybean | cytosol | 36.0 | 38.38 |
| KRH37131 | Soybean | cytosol, nucleus | 30.84 | 32.12 |
| KRH12127 | Soybean | cytosol | 30.84 | 32.12 |
| KRH50876 | Soybean | endoplasmic reticulum | 30.84 | 32.12 |
| KRH02236 | Soybean | cytosol, nucleus | 30.84 | 32.12 |
| KRG96405 | Soybean | cytosol | 29.55 | 31.03 |
| KRH68142 | Soybean | cytosol | 29.55 | 30.9 |
| KRH15695 | Soybean | cytosol | 12.77 | 27.12 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | EntrezGene:100779748 | MapMan:19.2.2.8.3.1 | MapMan:26.1.1.3.1 |
| EMBL:ACUP02003279 | InterPro:Cullin_CS | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain |
| InterPro:Cullin_repeat-like_dom_sf | EnsemblPlantsGene:GLYMA_05G140800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031461 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0061630 | GO:GO:0080008 | UniProt:I1K3E9 |
| InterPro:IPR016158 | InterPro:IPR036388 | EnsemblPlants:KRH58640 | ProteinID:KRH58640 | ProteinID:KRH58640.1 | PFAM:PF00888 |
| PFAM:PF10557 | ScanProsite:PS01256 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF27 | SMART:SM00182 |
| SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI00023393EA | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:33369730..33378540
Molecular Weight (calculated)
88568.2 Da
IEP (calculated)
7.728
GRAVY (calculated)
-0.345
Length
775 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTKLSPPM KKAKSIDSKN DDAVLKSPAA ASDDPNAPAL VAANLSRKKA TPPHPPKKLL IKFHKGIPTL PPNFEEDTWA KLKSAIGAIF LKQPVSCDLE
101: NLYQAVNDLC LYKMGGNLYQ RIEKECEAHI SAALQSLVGQ SPDLIVFLSL VERCWQDLCD QMLMIRGIAL FLDRTYVKQT TNVQSLWDMG LQLFCKYLSL
201: SPEVEHKTVT GLLRMIGSER SGESVDRTLL NHLLKMFTAL GIYAETFEKP FLECTSEFYA AEGMKYMQQS DAPDYLKHVE TRLQEEHERC LLYLDASTRK
301: PLIATAEKQL LERHIPAILD KGFTVLMDGN RIEDLQRMHS LFSRVNALES LKQALSSYIR RTGQGIVMDE EKDKDMVSSL LEFKASLDTI WEESFFKNEA
401: FSNSIKDAFE YLINLRQNRP AELIAKFLDE KLRAGNKGTS EEELEATLDK VLVLFRFIQG KDVFEAFYKK DLAKRLLLGK SASIDAEKSM ISKLKTECGS
501: QFTNKLEGMF KDIELSKEIN DSFKQSSQAR SKLASGIEMS VHVLTTGHWP TYPPMDVRLP HELNVYQDIF KEFYLSKYSG RRLMWQNSLG HCVLKAEFPK
601: GRKELAVSLF QTVVLMLFND AEKLSLQDIK DATGIEDKEL RRTLQSLACG KVRVLQKMPK GRDVEDDDLF VFNDGFTAPL YRIKVNAIQL KETVEENTST
701: TERVFHDRQY QIDAAIVRIM KTRKVLSHTL LITELFQQLK FPIKPADLKK RIESLIDREY LERDKSNPQI YNYLA
101: NLYQAVNDLC LYKMGGNLYQ RIEKECEAHI SAALQSLVGQ SPDLIVFLSL VERCWQDLCD QMLMIRGIAL FLDRTYVKQT TNVQSLWDMG LQLFCKYLSL
201: SPEVEHKTVT GLLRMIGSER SGESVDRTLL NHLLKMFTAL GIYAETFEKP FLECTSEFYA AEGMKYMQQS DAPDYLKHVE TRLQEEHERC LLYLDASTRK
301: PLIATAEKQL LERHIPAILD KGFTVLMDGN RIEDLQRMHS LFSRVNALES LKQALSSYIR RTGQGIVMDE EKDKDMVSSL LEFKASLDTI WEESFFKNEA
401: FSNSIKDAFE YLINLRQNRP AELIAKFLDE KLRAGNKGTS EEELEATLDK VLVLFRFIQG KDVFEAFYKK DLAKRLLLGK SASIDAEKSM ISKLKTECGS
501: QFTNKLEGMF KDIELSKEIN DSFKQSSQAR SKLASGIEMS VHVLTTGHWP TYPPMDVRLP HELNVYQDIF KEFYLSKYSG RRLMWQNSLG HCVLKAEFPK
601: GRKELAVSLF QTVVLMLFND AEKLSLQDIK DATGIEDKEL RRTLQSLACG KVRVLQKMPK GRDVEDDDLF VFNDGFTAPL YRIKVNAIQL KETVEENTST
701: TERVFHDRQY QIDAAIVRIM KTRKVLSHTL LITELFQQLK FPIKPADLKK RIESLIDREY LERDKSNPQI YNYLA
001: MSLPTKRSTF SAASASDDSS YSSPPMKKAK NDLHHSPQHP NTADKVVGFH MEEDPTPAAA NLSRKKATLP QPTKKFVIKL NKAKPTLPTN FEENTWEKLQ
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
Arabidopsis Description
CUL4Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.