Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G425300.1 | Wheat | cytosol | 92.31 | 37.13 |
| KRH11182 | Soybean | cytosol, plastid | 99.65 | 36.17 |
| KRH42547 | Soybean | cytosol | 95.45 | 35.5 |
| Bra025031.1-P | Field mustard | cytosol | 94.06 | 35.39 |
| CDY33461 | Canola | cytosol | 94.06 | 35.35 |
| KRH58640 | Soybean | cytosol | 95.45 | 35.23 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 96.15 | 35.03 |
| CDX77644 | Canola | cytosol | 93.71 | 34.94 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 97.9 | 34.91 |
| CDY43957 | Canola | cytosol | 93.36 | 34.41 |
| Bra017569.1-P | Field mustard | plastid | 94.41 | 34.35 |
| CDY35152 | Canola | plastid | 94.41 | 34.35 |
| CDX87735 | Canola | cytosol | 93.36 | 34.23 |
| CDY03235 | Canola | plastid | 94.41 | 34.18 |
| Bra022023.1-P | Field mustard | plastid | 93.36 | 34.01 |
| AT5G46210.1 | Thale cress | cytosol | 93.71 | 33.84 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 94.76 | 33.75 |
| Solyc02g070460.2.1 | Tomato | plastid | 92.31 | 32.92 |
| TraesCS5B01G427400.1 | Wheat | cytosol | 92.31 | 32.88 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 93.36 | 32.09 |
| EER93338 | Sorghum | plastid | 93.36 | 32.01 |
| TraesCS5D01G433700.3 | Wheat | cytosol, plastid | 92.31 | 31.81 |
| HORVU5Hr1G103580.2 | Barley | plastid | 92.31 | 31.69 |
| Zm00001d013116_P002 | Maize | plastid | 93.36 | 31.05 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 92.31 | 30.17 |
| KRG93520 | Soybean | cytosol | 48.6 | 18.96 |
| KRH45896 | Soybean | cytosol | 47.9 | 18.72 |
| KRH18483 | Soybean | cytosol | 47.9 | 18.69 |
| KRG99095 | Soybean | cytosol | 47.55 | 18.58 |
| KRH70713 | Soybean | cytosol | 44.06 | 17.33 |
| KRH02236 | Soybean | cytosol, nucleus | 41.96 | 16.13 |
| KRH50876 | Soybean | endoplasmic reticulum | 41.96 | 16.13 |
| KRH12127 | Soybean | cytosol | 41.96 | 16.13 |
| KRH37131 | Soybean | cytosol, nucleus | 41.96 | 16.13 |
| KRG96405 | Soybean | cytosol | 40.21 | 15.58 |
| KRH68142 | Soybean | cytosol | 39.86 | 15.38 |
| KRH15695 | Soybean | cytosol | 6.99 | 5.48 |
| KRH21072 | Soybean | plastid | 0.7 | 0.41 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:35.1 | EMBL:ACUP02008337 | InterPro:Cullin_CS |
| InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | EnsemblPlantsGene:GLYMA_13G218600 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 | GO:GO:0042787 |
| GO:GO:0061630 | GO:GO:0080008 | InterPro:IPR016158 | InterPro:IPR036388 | UniProt:K7M138 | EnsemblPlants:KRH21073 |
| ProteinID:KRH21073 | ProteinID:KRH21073.1 | PFAM:PF00888 | PFAM:PF10557 | ScanProsite:PS01256 | PFscan:PS50069 |
| PANTHER:PTHR11932 | PANTHER:PTHR11932:SF27 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF75632 |
| UniParc:UPI0002956B16 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:33200753..33203690
Molecular Weight (calculated)
33279.2 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.479
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MISKLKTECG SQFTNKLEGM FKDIELSKEI NESFKQSSQA RTKLPSGIEM SVHVLTTGYW PTYPPMDVRL PHELNVYQDI FKEFYLSKYS GRRLMWQNSL
101: GHCVLKAEFP KGKKELAVSL FQTVVLMLFN DAEKLSFQDI KDSTGIEDKE LRRTLQSLAC GKVRVLQKLP KGRDVEDDDS FVFNEGFTAP LYRIKVNAIQ
201: LKETVEENTS TTERVFQDRQ YQVDAAIVRI MKTRKVLSHT LLITELFQQL KFPIKPADLK KRIESLIDRE YLERDKNNPQ IYNYLA
101: GHCVLKAEFP KGKKELAVSL FQTVVLMLFN DAEKLSFQDI KDSTGIEDKE LRRTLQSLAC GKVRVLQKLP KGRDVEDDDS FVFNEGFTAP LYRIKVNAIQ
201: LKETVEENTS TTERVFQDRQ YQVDAAIVRI MKTRKVLSHT LLITELFQQL KFPIKPADLK KRIESLIDRE YLERDKNNPQ IYNYLA
001: MSNQKKRNFQ IEAFKHRVVV DPKYADKTWQ ILERAIHQIY NQDASGLSFE ELYRNAYNMV LHKFGEKLYT GFIATMTSHL KEKSKLIEAA QGGSFLEELN
101: KKWNEHNKAL EMIRDILMYM DRTYIESTKK THVHPMGLNL WRDNVVHFTK IHTRLLNTLL DLVQKERIGE VIDRGLMRNV IKMFMDLGES VYQEDFEKPF
201: LDASSEFYKV ESQEFIESCD CGDYLKKSEK RLTEEIERVA HYLDAKSEEK ITSVVEKEMI ANHMQRLVHM ENSGLVNMLL NDKYEDLGRM YNLFRRVTNG
301: LVTVRDVMTS HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDKIINTA FGNDKTFQNA LNSSFEYFIN LNARSPEFIS LFVDDKLRKG LKGITDVDVE
401: VILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SEDTMRGFYG SHPELSEGPT LIVQVLTTGS
501: WPTQPAVPCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAIF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPA ADLKRCLQSL
601: ACVKGKNVIK KEPMSKDIGE EDLFVVNDKF TSKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRKI LDHNNIIAEV TKQLQPRFLA
701: NPTEIKKRIE SLIERDFLER DSTDRKLYRY LA
101: KKWNEHNKAL EMIRDILMYM DRTYIESTKK THVHPMGLNL WRDNVVHFTK IHTRLLNTLL DLVQKERIGE VIDRGLMRNV IKMFMDLGES VYQEDFEKPF
201: LDASSEFYKV ESQEFIESCD CGDYLKKSEK RLTEEIERVA HYLDAKSEEK ITSVVEKEMI ANHMQRLVHM ENSGLVNMLL NDKYEDLGRM YNLFRRVTNG
301: LVTVRDVMTS HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDKIINTA FGNDKTFQNA LNSSFEYFIN LNARSPEFIS LFVDDKLRKG LKGITDVDVE
401: VILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SEDTMRGFYG SHPELSEGPT LIVQVLTTGS
501: WPTQPAVPCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAIF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPA ADLKRCLQSL
601: ACVKGKNVIK KEPMSKDIGE EDLFVVNDKF TSKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRKI LDHNNIIAEV TKQLQPRFLA
701: NPTEIKKRIE SLIERDFLER DSTDRKLYRY LA
Arabidopsis Description
CUL3ACUL3A [Source:UniProtKB/TrEMBL;Acc:A0A178WM88]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.