Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G425300.1 | Wheat | cytosol | 85.42 | 99.72 |
| TraesCS5B01G427400.1 | Wheat | cytosol | 96.14 | 99.38 |
| HORVU5Hr1G103580.2 | Barley | plastid | 99.4 | 99.04 |
| KRH21073 | Soybean | cytosol | 31.81 | 92.31 |
| EER93338 | Sorghum | plastid | 90.12 | 89.69 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 89.16 | 88.94 |
| Zm00001d013116_P002 | Maize | plastid | 88.92 | 85.81 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 77.95 | 80.57 |
| KRH11182 | Soybean | cytosol, plastid | 76.02 | 80.08 |
| KRH58640 | Soybean | cytosol | 74.58 | 79.87 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 74.7 | 78.98 |
| KRH42547 | Soybean | cytosol | 72.89 | 78.67 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 75.9 | 78.55 |
| CDY33461 | Canola | cytosol | 71.33 | 77.79 |
| CDX77644 | Canola | cytosol | 71.69 | 77.58 |
| Bra025031.1-P | Field mustard | cytosol | 70.96 | 77.5 |
| Bra022023.1-P | Field mustard | plastid | 72.77 | 76.94 |
| CDY43957 | Canola | cytosol | 71.81 | 76.8 |
| CDX87735 | Canola | cytosol | 71.69 | 76.28 |
| CDY35152 | Canola | plastid | 72.05 | 76.08 |
| Bra017569.1-P | Field mustard | plastid | 71.93 | 75.95 |
| CDY03235 | Canola | plastid | 72.29 | 75.95 |
| AT5G46210.1 | Thale cress | cytosol | 71.81 | 75.25 |
| Solyc02g070460.2.1 | Tomato | plastid | 72.41 | 74.94 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 78.07 | 74.06 |
| KRH21072 | Soybean | plastid | 40.96 | 70.39 |
| TraesCS6D01G285800.1 | Wheat | cytosol | 36.02 | 40.62 |
| TraesCS2D01G522400.1 | Wheat | cytosol | 34.82 | 39.48 |
| TraesCS1D01G098500.3 | Wheat | cytosol | 29.28 | 32.66 |
| TraesCS1D01G098400.2 | Wheat | cytosol | 28.92 | 32.17 |
| TraesCS3D01G040900.1 | Wheat | cytosol | 25.9 | 28.98 |
| TraesCS3D01G450200.1 | Wheat | cytosol | 6.02 | 16.67 |
Protein Annotations
Description
No Description!
Coordinates
chr5D:+:489348806..489357940
Molecular Weight (calculated)
94167.9 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.355
Length
830 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHPHASAPK RPFSSSSPSP ASPAPPHMKK AKLPASSSSS AGPTEKSGLH LDPAAAAAVR GGGRTNGEED VDMLLADQDE LRAPNASAPG GGTANLFRKK
101: ATLPQPPATA ATRKPLRIKI GQPKLPKNFE EDTWAILKDA ITAIFLKQKL SCDVEKLYQA AGDLCLHKLG ANLYERVKKE CEIHISAKIS ALVGQSPDLV
201: VFLSLVQRTW QDFCDQMLII RGIALLLDVK YVKNVANLCS VWDMGLQLFR KHISLSPEIE HKTVTGLLRL IESERLGEAI DKTLLSHLLK MFTDLGMYSE
301: TFEKPFLECT SEFYATEGVK YLQQSDIPDY LRHAESRLQE EHDRCILYLE ANTRKPLIAT TEKQLLQRHT SAIIEKGFTV LMEANRVTDL SRMYTLFQRV
401: DAIEMLKQAL SLYIRGTGQG IIMDEEKDKD LVPFLLEFKA SLDKILEESF AKNEAFSNTI KESFEHLINL RQNRPAELIA KFLDEKLRAG NKGTSEEELE
501: GILDKVLVLF RFIQGKDVFE AFYKKDLAKR LLLGKSASID AEKSMITKLK TECGSQFTNK LEGMFKDIEL SKEINDSFKQ SSQARTKLPT GIEMSVHVLT
601: TGYWPTYPPM DVKLPHELNV YQDIFKEFYL SKYSGRRLMW QNSLGHCVLK VEFPKGRKEL AVSLFQSVVL MLFNDAQKLS FVDIKESTGI EDKELRRTLQ
701: SLACGKVRVL QKTPKGRDID DKDEFVFNED FSAPLYRIKV NAIQMKETVE ENTSTTERVF QDRQYQVDAA IVRIMKTRKT LSHTLLITEL FQQLKFPIKP
801: ADMKKRIESL IDREYLERDR SNPQIYNYLA
101: ATLPQPPATA ATRKPLRIKI GQPKLPKNFE EDTWAILKDA ITAIFLKQKL SCDVEKLYQA AGDLCLHKLG ANLYERVKKE CEIHISAKIS ALVGQSPDLV
201: VFLSLVQRTW QDFCDQMLII RGIALLLDVK YVKNVANLCS VWDMGLQLFR KHISLSPEIE HKTVTGLLRL IESERLGEAI DKTLLSHLLK MFTDLGMYSE
301: TFEKPFLECT SEFYATEGVK YLQQSDIPDY LRHAESRLQE EHDRCILYLE ANTRKPLIAT TEKQLLQRHT SAIIEKGFTV LMEANRVTDL SRMYTLFQRV
401: DAIEMLKQAL SLYIRGTGQG IIMDEEKDKD LVPFLLEFKA SLDKILEESF AKNEAFSNTI KESFEHLINL RQNRPAELIA KFLDEKLRAG NKGTSEEELE
501: GILDKVLVLF RFIQGKDVFE AFYKKDLAKR LLLGKSASID AEKSMITKLK TECGSQFTNK LEGMFKDIEL SKEINDSFKQ SSQARTKLPT GIEMSVHVLT
601: TGYWPTYPPM DVKLPHELNV YQDIFKEFYL SKYSGRRLMW QNSLGHCVLK VEFPKGRKEL AVSLFQSVVL MLFNDAQKLS FVDIKESTGI EDKELRRTLQ
701: SLACGKVRVL QKTPKGRDID DKDEFVFNED FSAPLYRIKV NAIQMKETVE ENTSTTERVF QDRQYQVDAA IVRIMKTRKT LSHTLLITEL FQQLKFPIKP
801: ADMKKRIESL IDREYLERDR SNPQIYNYLA
001: MSLPTKRSTF SAASASDDSS YSSPPMKKAK NDLHHSPQHP NTADKVVGFH MEEDPTPAAA NLSRKKATLP QPTKKFVIKL NKAKPTLPTN FEENTWEKLQ
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
Arabidopsis Description
CUL4Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.