Factsheet for TraesCS1D01G098500.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G118000.1	Wheat	cytosol	99.87	99.87
HORVU1Hr1G020400.1	Barley	cytosol	99.87	99.73
TraesCS1A01G090000.1	Wheat	cytosol	99.6	99.6
Os01t0369000-01	Rice	cytosol	95.7	95.7
EES00748	Sorghum	cytosol	95.43	95.43
TraesCS1D01G098400.2	Wheat	cytosol	89.65	89.41
GSMUA_AchrUn_...	Banana	cytosol	86.29	88.31
GSMUA_Achr7P03700_001	Banana	cytosol	87.77	87.77
VIT_05s0020g01320.t01	Wine grape	cytosol	87.23	87.23
GSMUA_Achr1P14740_001	Banana	cytosol	86.42	86.42
KRH02236	Soybean	cytosol, nucleus	85.62	85.62
KRH37131	Soybean	cytosol, nucleus	85.48	85.48
KRH50876	Soybean	endoplasmic reticulum	85.35	85.35
KRH12127	Soybean	cytosol	85.35	85.35
PGSC0003DMT400061802	Potato	cytosol	80.38	81.36
KRH15695	Soybean	cytosol	38.71	78.9
PGSC0003DMT400029607	Potato	cytosol	77.82	78.35
PGSC0003DMT400023105	Potato	cytosol	56.59	74.25
PGSC0003DMT400023111	Potato	cytosol	72.31	72.9
PGSC0003DMT400022865	Potato	cytosol	71.77	72.65
CDX91291	Canola	nucleus	11.69	71.31
PGSC0003DMT400038140	Potato	cytosol	20.43	66.96
TraesCS3D01G040900.1	Wheat	cytosol	66.13	66.31
PGSC0003DMT400097727	Potato	cytosol	14.25	61.63
Solyc05g018040.1.1	Tomato	cytosol	19.76	58.57
PGSC0003DMT400085888	Potato	cytosol	9.95	53.62
TraesCS2D01G522400.1	Wheat	cytosol	35.35	35.93
TraesCS6D01G285800.1	Wheat	cytosol	34.68	35.05
TraesCS5D01G433700.3	Wheat	cytosol, plastid	32.66	29.28
TraesCS3D01G450200.1	Wheat	cytosol	11.69	29.0

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	InterPro:Cullin_CS	InterPro:Cullin_N
InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625
InterPro:IPR016158	InterPro:IPR036388	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069
PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788
SUPFAM:SSF75632	EnsemblPlantsGene:TraesCS1D01G098500	EnsemblPlants:TraesCS1D01G098500.3	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chr1D:-:85195820..85202282

Molecular Weight (calculated)

86862.6 Da

IEP (calculated)

7.298

GRAVY (calculated)

-0.453

Length

744 amino acids

Sequence
(BLAST)

001: MTTHERKTVD LEEGWAFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY NMCTQKPPHD YSQQLYDKYR ESFEEYISSM VLPSLREKHD EFMLRELVKR
101: WSNHKVMVRW LSRFFHYLDR YFISRRSLPA LREVGLSCFR DLVYQEIKGK VKSAVISLID QEREGEQIDR ALLKNVLDIF VEIGLGSMEC YENDFEDFLL
201: KDTADYYSIK AQTWIVEDSC PDYMLKAEEC LKREKERVAH YLHSSSEPKL LEKVQHELLT QYASQLLEKE HSGCHALLRD DKVEDLSRMY RLFSRITRGL
301: EPVSQIFKQH VTNEGTALVK QAEDAASNKK PEKKDIVGMQ EQVFVRKIIE LHDKYVAYVT DCFQGHTLFH KALKEAFEVF CNKGVSGSSS AELLATFCDN
401: ILKKGGSEKL SDEAIEDTLE KVVRLLAYIS DKDLFAEFYR KKLARRLLFD KSANDEHERS ILTKLKQQCG GQFTSKMEGM VTDLTVARDH QTKFEEFIST
501: HPELNPGIDL AVTVLTTGFW PTYKSFDINL PAEMVRCVEV FKEFYQTRTK HRKLTWIYSL GICHITAKFE AKTIELIVTT YQAALLLLFN GADKLSYSEI
601: VTQLNLSDDD VVRLLHSLSC AKYKILTKEP SNRSISPNDV FEFNSKFTDK MRRIKIPLPP VDEKKKVVED VDKDRRYAID ASIVRIMKSR KVLGHQTLVM
701: ECVEQLGRMF KPDFKAIKKR IEDLITRDYL ERDKENPNVY RYLA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.