Factsheet for TraesCS1D01G098400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G089900.1	Wheat	cytosol, golgi	100.0	100.0
TraesCS1B01G117900.1	Wheat	cytosol	99.73	99.73
HORVU1Hr1G020390.1	Barley	cytosol	98.93	98.93
EES19028	Sorghum	cytosol	93.16	93.41
Os05t0149600-02	Rice	cytosol, plasma membrane	32.04	92.28
Zm00001d010858_P007	Maize	cytosol	92.09	91.72
TraesCS1D01G098500.3	Wheat	cytosol	89.41	89.65
Zm00001d024855_P007	Maize	cytosol	91.29	87.87
VIT_05s0020g01320.t01	Wine grape	cytosol	83.38	83.6
GSMUA_AchrUn_...	Banana	cytosol	80.97	83.08
GSMUA_Achr7P03700_001	Banana	cytosol	82.57	82.8
GSMUA_Achr1P14740_001	Banana	cytosol	82.31	82.53
KRH50876	Soybean	endoplasmic reticulum	82.04	82.26
KRH12127	Soybean	cytosol	81.77	81.99
KRH02236	Soybean	cytosol, nucleus	81.77	81.99
KRH37131	Soybean	cytosol, nucleus	81.64	81.85
PGSC0003DMT400061802	Potato	cytosol	77.75	78.91
PGSC0003DMT400029607	Potato	cytosol	76.68	77.4
KRH15695	Soybean	cytosol	36.46	74.52
PGSC0003DMT400023105	Potato	cytosol	55.76	73.37
PGSC0003DMT400023111	Potato	cytosol	71.18	71.95
PGSC0003DMT400022865	Potato	cytosol	70.11	71.16
CDX91291	Canola	nucleus	11.26	68.85
TraesCS3D01G040900.1	Wheat	cytosol	66.35	66.71
PGSC0003DMT400038140	Potato	cytosol	19.71	64.76
PGSC0003DMT400097727	Potato	cytosol	14.48	62.79
Solyc05g018040.1.1	Tomato	cytosol	19.3	57.37
PGSC0003DMT400085888	Potato	cytosol	8.98	48.55
TraesCS2D01G522400.1	Wheat	cytosol	34.72	35.38
TraesCS6D01G285800.1	Wheat	cytosol	34.58	35.05
TraesCS3D01G450200.1	Wheat	cytosol	12.33	30.67
TraesCS5D01G433700.3	Wheat	cytosol, plastid	32.17	28.92

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	InterPro:Cullin_CS	InterPro:Cullin_N
InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625
InterPro:IPR016158	InterPro:IPR036388	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069
PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788
SUPFAM:SSF75632	EnsemblPlantsGene:TraesCS1D01G098400	EnsemblPlants:TraesCS1D01G098400.2	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chr1D:-:85186719..85192206

Molecular Weight (calculated)

86794.3 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.429

Length

746 amino acids

Sequence
(BLAST)

001: MAGHGQDRKT IDLEDGWAFM QRGITKLINI LEGKPEPQFS SEDYMMLYTT IYNMCTQKPP HDYSQQLYDK YREAFEEYIR ATVLPSLKEK HDEFMLRELV
101: QRWSNHKVMV RWLSRFFHYL DRYFITRRSL TALRDVGLIC FRDLIFQEIK GKVKDAVIAL IDQEREGEQI DRALLKNVLD IFVEIGLGNM DCYENDFEDF
201: LLKDTTDYYS VKAQSWIVED SCPDYMIKAE ECLKREKERV GHYLHINSEP KLLEKVQNEL LASYATQLLE KEHSGCFALL RDDKVEDLSR MYRLFSKITR
301: GLEPISNMFK THVTNEGTAL VKQAEDSANN KKPEKKEMVG MQEQVFVWKI IELHDKYVAY VTDCFQGHTL FHKALKEAFE VFCNKGVSGS SSAELLATFC
401: DNILKKGCSE KLSDEAIEDA LEKVVRLLAY ISDKDLFAEF YRKKLARRLL FDKSANDEHE RSILTKLKQQ CGGQFTSKME GMVTDLTVAR DHQTKFEEFV
501: ADHPESNPGV DLAVTVLTTG FWPTYKTFDI NLPSEMVKCV EVFKEFYATR TKHRKLTWIY SLGTCNISAK FDAKTIELIV TTYQAALLLL FNGSTKLSYS
601: EIVTQLNLSD DDVVRLLHSL SCAKYKILSK EPAGRTISPN DSFEFNSKFT DRMRRIKIPL PPVDEKKKVV EDVDKDRRYA IDASIVRIMK SRKVMAHTQL
701: VAECVEQLSR MFKPDFKAIK KRIEDLITRD YLERDKDNAN TYRYLA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.