Factsheet for Zm00001d010858_P007

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19028	Sorghum	cytosol	97.73	98.39
Os05t0149600-02	Rice	cytosol, plasma membrane	33.24	96.14
Zm00001d024855_P007	Maize	cytosol	95.99	92.77
TraesCS1D01G098400.2	Wheat	cytosol	91.72	92.09
TraesCS1A01G089900.1	Wheat	cytosol, golgi	91.72	92.09
TraesCS1B01G117900.1	Wheat	cytosol	91.59	91.96
HORVU1Hr1G020390.1	Barley	cytosol	91.05	91.42
GSMUA_AchrUn_...	Banana	cytosol	82.38	84.87
VIT_05s0020g01320.t01	Wine grape	cytosol	83.85	84.41
GSMUA_Achr7P03700_001	Banana	cytosol	83.58	84.14
GSMUA_Achr1P14740_001	Banana	cytosol	82.91	83.47
KRH50876	Soybean	endoplasmic reticulum	82.64	83.2
KRH02236	Soybean	cytosol, nucleus	82.38	82.93
KRH12127	Soybean	cytosol	81.98	82.53
KRH37131	Soybean	cytosol, nucleus	81.84	82.39
PGSC0003DMT400061802	Potato	cytosol	77.44	78.91
PGSC0003DMT400029607	Potato	cytosol	76.37	77.4
KRH15695	Soybean	cytosol	36.05	73.97
PGSC0003DMT400023105	Potato	cytosol	55.81	73.72
PGSC0003DMT400023111	Potato	cytosol	71.03	72.09
PGSC0003DMT400022865	Potato	cytosol	70.23	71.56
CDX91291	Canola	nucleus	11.48	70.49
PGSC0003DMT400097727	Potato	cytosol	14.69	63.95
PGSC0003DMT400038140	Potato	cytosol	19.09	63.0
Solyc05g018040.1.1	Tomato	cytosol	19.49	58.17
PGSC0003DMT400085888	Potato	cytosol	9.08	49.28
Zm00001d049487_P001	Maize	cytosol	34.18	34.64
Zm00001d018043_P001	Maize	cytosol	33.91	34.51
Zm00001d024466_P001	Maize	cytosol	32.84	33.33
Zm00001d042193_P001	Maize	cytosol	11.75	30.14
Zm00001d034361_P001	Maize	cytosol, plastid	30.57	27.52
Zm00001d013116_P002	Maize	plastid	30.57	26.63

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	EntrezGene:103635893	MapMan:19.2.2.8.1.2	UniProt:A0A1D6FUG6
ProteinID:AQK95121.1	InterPro:Cullin_CS	InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain
InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	InterPro:IPR016158	InterPro:IPR036388	PFAM:PF00888
PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182
SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788	SUPFAM:SSF75632	UniParc:UPI000843BFCB	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d010858	EnsemblPlants:Zm00001d010858_P007	EnsemblPlants:Zm00001d010858_T007	SEG:seg	:

Description

cullin1Cullin-1

Coordinates

chr8:+:130735352..130743200

Molecular Weight (calculated)

87409.0 Da

IEP (calculated)

6.754

GRAVY (calculated)

-0.469

Length

749 amino acids

Sequence
(BLAST)

001: MAGQERRTID LEEGWAFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY NMCTQKPPHD YSQQLYDKYR ESFEEYITSM VLPSLREKHD EFMLRELVQR
101: WSNHKVMVRW LSRFFHYLDR YFISRRSLTP LKEVGLTCFR ELIYQEIKGQ VKDAVIALID KEREGEQIDR GLLKNVLDIF VEIGLGQMEC YENDFEDFLL
201: KDTTEYYSVK AQSWILEDSC PDYMIKAEEC LKREKERVGH YLHISSEQNF YNLEFSQKVQ NELLAQYATP LLEKEHSGCS ALLRDDKVED LSRMYRLFSK
301: ISRGLEPISN MFKTHVTNEG TALVKQAEDS ASNKKPEKKD IVGMQEQVFV WKIIELHDKY VAYVTECFQG HTLFHKALKE AFEVFCNKGV SGSSSAELLA
401: TFCDNILKKG CSEKLSDEAI EDALEKVVRM LAYISDKDLF AEFYRKKLAR RLLFDKSAND EHERSILTKL KQQCGGQFTS KMEGMVTDLT VARDHQTKFE
501: EFVAGHPELN PGIDLAVTVL TTGFWPSYKT FDINLPAEMV KCVEVFKEFY QTRTKHRKLT WIYSLGTCNI NAKFDAKPIE LIVTTYQAAL LLLFNGSDRL
601: SYSEIVTQLN LSDDDVVRLL HSLSCAKYKI LNKEPASRSI SPNDVFEFNS KFTDRMRRIK VPLPPVDEKK KVVEDVDKDR RYAIDASIVR IMKSRKVMGH
701: QQLVAECVEQ LSRMFKPDFK AIKKRIEDLI TRDYLERDKD NANTYKYLA

Best Arabidopsis Sequence Match ( AT1G02980.2 )
(BLAST)

001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA

Arabidopsis Description

CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.