Factsheet for Os05t0149600-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0786800-01	Rice	cytosol, plasma membrane	23.94	40.0
EES19028	Sorghum	cytosol	96.53	33.6
Zm00001d010858_P007	Maize	cytosol	96.14	33.24
Os01t0369000-01	Rice	cytosol	92.66	32.26
Zm00001d024855_P007	Maize	cytosol	96.14	32.13
HORVU1Hr1G020390.1	Barley	cytosol	92.28	32.04
TraesCS1D01G098400.2	Wheat	cytosol	92.28	32.04
TraesCS1A01G089900.1	Wheat	cytosol, golgi	92.28	32.04
TraesCS1B01G117900.1	Wheat	cytosol	91.89	31.9
GSMUA_AchrUn_...	Banana	cytosol	83.4	29.71
VIT_05s0020g01320.t01	Wine grape	cytosol	84.17	29.3
GSMUA_Achr7P03700_001	Banana	cytosol	82.63	28.76
GSMUA_Achr1P14740_001	Banana	cytosol	81.85	28.49
KRH12127	Soybean	cytosol	81.08	28.23
KRH37131	Soybean	cytosol, nucleus	80.69	28.09
KRH50876	Soybean	endoplasmic reticulum	80.31	27.96
KRH02236	Soybean	cytosol, nucleus	80.31	27.96
Solyc05g018040.1.1	Tomato	cytosol	25.87	26.69
Os01t0369200-01	Rice	cytosol	73.36	25.47
Os02t0746000-01	Rice	cytosol	41.31	14.54
Os04t0643000-01	Rice	cytosol, plasma membrane	40.15	14.23
Os08t0170900-01	Rice	cytosol	40.15	14.23
Os05t0193900-00	Rice	cytosol	6.56	4.22
KRH15695	Soybean	cytosol	4.63	3.29
Os01t0935300-02	Rice	cytosol	3.09	2.67
Os01t0706200-01	Rice	cytosol	0.39	0.62

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	MapMan:35.1	UniProt:A0A0P0WHX8	ProteinID:BAS92287.1	InterPro:Cullin_CS
InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625
InterPro:IPR016158	InterPro:IPR036388	EnsemblPlantsGene:Os05g0149600	EnsemblPlants:Os05t0149600-02	PFAM:PF00888	PFAM:PF10557
ScanProsite:PS01256	PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884
SUPFAM:SSF46785	SUPFAM:SSF75632	UniParc:UPI000393C2D0	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

Similar to CULLIN1-like protein 1. (Os05t0149600-01);Similar to predicted protein. (Os05t0149600-02)

Coordinates

chr5:-:2834206..2836030

Molecular Weight (calculated)

30207.5 Da

IEP (calculated)

9.230

GRAVY (calculated)

-0.375

Length

259 amino acids

Sequence
(BLAST)

001: VARDHQTKFE EFVAAHQELN PGIDLAVTVL TTGFWPSYKT FDINLPAEMV KCVEVFKEFY QTRTKHRKLT WIYSLGTCNI NAKFEAKTIE LIVTTYQAAL
101: LLLFNGSDRL TYSEIVTQLN LSDDDVVRLL HSLSCAKYKI LNKEPANRSI SPNDVFEFNS KFTDRMRRIK IPLPPVDEKK KVVEDVDKDR RYAIDASIVR
201: IMKSRKVMGH QQLVAECVEQ LSRMFKPDFK AIKKRIEDLI TRDYLEREKD NANVYRYLA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.