CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010858_P007	Maize	cytosol	98.39	97.73
Os05t0149600-02	Rice	cytosol, plasma membrane	33.6	96.53
Zm00001d024855_P007	Maize	cytosol	97.31	93.42
TraesCS1A01G089900.1	Wheat	cytosol, golgi	93.41	93.16
TraesCS1D01G098400.2	Wheat	cytosol	93.41	93.16
TraesCS1B01G117900.1	Wheat	cytosol	93.28	93.03
HORVU1Hr1G020390.1	Barley	cytosol	92.47	92.23
EES00748	Sorghum	cytosol	91.67	91.67
GSMUA_AchrUn_...	Banana	cytosol	83.74	85.69
VIT_05s0020g01320.t01	Wine grape	cytosol	85.08	85.08
GSMUA_Achr7P03700_001	Banana	cytosol	84.95	84.95
GSMUA_Achr1P14740_001	Banana	cytosol	84.41	84.41
KRH50876	Soybean	endoplasmic reticulum	84.01	84.01
KRH02236	Soybean	cytosol, nucleus	83.74	83.74
KRH12127	Soybean	cytosol	83.2	83.2
KRH37131	Soybean	cytosol, nucleus	83.06	83.06
PGSC0003DMT400061802	Potato	cytosol	79.17	80.14
PGSC0003DMT400029607	Potato	cytosol	77.42	77.94
KRH15695	Soybean	cytosol	36.83	75.07
PGSC0003DMT400023105	Potato	cytosol	56.45	74.07
PGSC0003DMT400023111	Potato	cytosol	72.04	72.63
PGSC0003DMT400022865	Potato	cytosol	71.24	72.11
CDX91291	Canola	nucleus	11.56	70.49
PGSC0003DMT400038140	Potato	cytosol	19.89	65.2
KXG32508	Sorghum	cytosol	65.05	64.97
PGSC0003DMT400097727	Potato	cytosol	14.78	63.95
Solyc05g018040.1.1	Tomato	cytosol	19.76	58.57
PGSC0003DMT400085888	Potato	cytosol	9.27	50.0
KXG35165	Sorghum	cytosol	14.38	44.21
EES14624	Sorghum	cytosol	34.68	34.96
EES05529	Sorghum	cytosol	34.41	34.78
EES04173	Sorghum	cytosol	12.23	31.82
EER93338	Sorghum	plastid	30.91	27.58

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	EntrezGene:8075980	UniProt:C5Z041
InterPro:Cullin_CS	InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf
EnsemblPlants:EES19028	ProteinID:EES19028	ProteinID:EES19028.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630	InterPro:IPR016158
InterPro:IPR036388	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069	PANTHER:PTHR11932
PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	EnsemblPlantsGene:SORBI_3009G044800	SUPFAM:SSF46785	SUPFAM:SSF74788
SUPFAM:SSF75632	unigene:Sbi.17936	UniParc:UPI0001A88C14	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002440598.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:4269830..4276588

Molecular Weight (calculated)

86835.6 Da

IEP (calculated)

6.856

GRAVY (calculated)

-0.456

Length

744 amino acids

Sequence
(BLAST)

001: MAGQERRTID LEEGWAFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY NMCTQKPPHD YSQQLYDKYR ESFEEYITSM VLPSLREKHD EFMLRELVQR
101: WSNHKVMVRW LSRFFHYLDR YFISRRSLTP LKEVGLTCFR ELIYQEIKGQ VKDAVIALID KEREGEQIDR ALLKNVLDIF VEIGLGQMEC YENDFEDFLL
201: KDTTEYYSVK AQSWILEDSC PDYMIKAEEC LKREKERVGH YLHISSEQKL LEKVQNELLA QYATPLLEKE HSGCSALLRD DKVEDLSRMY RLFSKITRGL
301: EPISNMFKTH VTNEGTALVK QAEDSASNKK PEKKDMVGMQ EQVFVWKIIE LHDKYVAYVT ECFQGHTLFH KALKEAFEVF CNKGVSGSSS AELLATFCDN
401: ILKKGCSEKL SDEAIEDALE KVVRLLAYIS DKDLFAEFYR KKLARRLLFD KSANDEHERS ILTKLKQQCG GQFTSKMEGM VTDLTVARDH QTKFEEFVAG
501: HPELNPGIDL AVTVLTTGFW PSYKTFDINL PAEMVKCVEV FKEFYQTRTK HRKLTWIYSL GTCNINAKFD AKPIELIVTT YQAALLLLFN GSDRLSYSEI
601: VTQLNLSDDD VVRLLHSLSC AKYKILTKEP ANRSISPNDV FEFNSKFTDR MRRIKIPLPP VDEKKKVVED VDKDRRYAID ASIVRIMKSR KVMGHQQLVA
701: ECVEQLSRMF KPDFKAIKKR IEDLITRDYL ERDKDNANMY KYLA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.