Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042193_P001 | Maize | cytosol | 89.51 | 87.67 |
| HORVU3Hr1G098530.4 | Barley | cytosol | 65.38 | 62.13 |
| TraesCS3D01G450200.1 | Wheat | cytosol | 63.99 | 61.0 |
| TraesCS3B01G497300.1 | Wheat | cytosol | 63.99 | 61.0 |
| TraesCS3A01G457400.1 | Wheat | cytosol | 63.99 | 61.0 |
| Os01t0935300-02 | Rice | cytosol | 63.64 | 60.67 |
| PGSC0003DMT400063662 | Potato | cytosol | 25.87 | 25.52 |
| Solyc01g099290.2.1 | Tomato | cytosol | 23.08 | 24.81 |
| KXG35165 | Sorghum | cytosol | 20.28 | 23.97 |
| AT1G59790.1 | Thale cress | cytosol | 27.62 | 21.12 |
| EES00748 | Sorghum | cytosol | 32.52 | 12.5 |
| AT4G02570.1 | Thale cress | cytosol | 31.82 | 12.33 |
| CDY18013 | Canola | cytosol | 31.82 | 12.33 |
| CDX90932 | Canola | cytosol | 31.82 | 12.33 |
| Bra000874.1-P | Field mustard | cytosol | 31.82 | 12.33 |
| EES19028 | Sorghum | cytosol | 31.82 | 12.23 |
| CDY22060 | Canola | cytosol | 31.47 | 12.2 |
| CDY21896 | Canola | cytosol | 31.47 | 12.2 |
| KRH68142 | Soybean | cytosol | 30.77 | 11.88 |
| KRG96405 | Soybean | cytosol | 30.42 | 11.79 |
| GSMUA_Achr9P17620_001 | Banana | cytosol | 29.37 | 11.4 |
| KXG32508 | Sorghum | cytosol | 27.27 | 10.47 |
| Bra036257.1-P | Field mustard | cytosol, nucleus, peroxisome | 31.47 | 9.13 |
| EES05529 | Sorghum | cytosol | 22.38 | 8.7 |
| EES14624 | Sorghum | cytosol | 19.58 | 7.59 |
| EER93338 | Sorghum | plastid | 17.83 | 6.12 |
Protein Annotations
| Gene3D:1.20.1310.10 | MapMan:35.1 | UniProt:C5XH48 | InterPro:Cullin_N | InterPro:Cullin_repeat-like_dom_sf | EnsemblPlants:EES04173 |
| ProteinID:EES04173 | ProteinID:EES04173.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 |
| PFAM:PF00888 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF83 | EnsemblPlantsGene:SORBI_3003G417900 | SUPFAM:SSF74788 | UniParc:UPI0003C6A950 |
Description
hypothetical protein
Coordinates
chr3:+:72376391..72380819
Molecular Weight (calculated)
33390.1 Da
IEP (calculated)
5.055
GRAVY (calculated)
-0.235
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSHLSFEEG WKVLEQGILK CSKILECTSI RPTVNEYMNY YDCAYKMAVQ KQHYCQEMYN GFRMTLAECV RTMVLPHLMH KQNDSFFREL VKMWSNYCIM
101: IRCVTGFFNY LDRCFVEQYK LPSLSDAAAT AFFGPVFSYF NDEARTALLT LIQRERDGSM MDSSLHDVMH GICCSEVKSI MQNAFLDETY GYYSMRSSEW
201: IRHYSLPDYL AKVEESMETE TKRLAYYLEI SSGDSYPLCL QAVNAPLMET YVNYVTEQQI SGQLMLETYK TVEEELLGRC RSLTLG
101: IRCVTGFFNY LDRCFVEQYK LPSLSDAAAT AFFGPVFSYF NDEARTALLT LIQRERDGSM MDSSLHDVMH GICCSEVKSI MQNAFLDETY GYYSMRSSEW
201: IRHYSLPDYL AKVEESMETE TKRLAYYLEI SSGDSYPLCL QAVNAPLMET YVNYVTEQQI SGQLMLETYK TVEEELLGRC RSLTLG
001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
Arabidopsis Description
Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.