CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009918_P001	Maize	cytosol	76.88	79.14
Os05t0365000-00	Rice	cytosol	69.09	75.35
HORVU1Hr1G058630.1	Barley	cytosol	67.01	71.67
TraesCS1D01G232200.1	Wheat	cytosol	67.53	71.04
TraesCS1A01G229800.1	Wheat	cytosol	68.05	70.81
TraesCS1B01G244300.1	Wheat	cytosol	67.53	70.08
GSMUA_Achr11P...	Banana	cytosol	46.23	51.9
Solyc09g075080.2.1	Tomato	cytosol	38.7	45.85
AT4G02440.1	Thale cress	cytosol	39.22	44.94
CDY22051	Canola	cytosol	38.7	44.88
CDY50384	Canola	cytosol	38.18	44.28
KRH68185	Soybean	nucleus	37.4	44.04
PGSC0003DMT400029665	Potato	cytosol, endoplasmic reticulum, nucleus	37.92	43.98
GSMUA_Achr8P10140_001	Banana	plastid	47.01	43.83
VIT_07s0005g00340.t01	Wine grape	cytosol	43.12	43.46
Bra036266.1-P	Field mustard	cytosol	39.22	36.92

Protein Annotations

MapMan:19.2.2.8.1.4.6	MapMan:26.1.1.3.4	EntrezGene:8062696	UniProt:C5YWV9	EnsemblPlants:EES18088	ProteinID:EES18088
ProteinID:EES18088.1	InterPro:F-box-like_dom_sf	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0009585	GO:GO:0009605	GO:GO:0009628	GO:GO:0009791
GO:GO:0009987	GO:GO:0010099	GO:GO:0048366	GO:GO:0048573	PANTHER:PTHR31348	PANTHER:PTHR31348:SF4
EnsemblPlantsGene:SORBI_3009G113400	SUPFAM:SSF81383	unigene:Sbi.9919	UniParc:UPI0001A88CB9	RefSeq:XP_002439658.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:45419467..45420624

Molecular Weight (calculated)

40671.9 Da

IEP (calculated)

6.170

GRAVY (calculated)

-0.132

Length

385 amino acids

Sequence
(BLAST)

001: MDRQQAEEGG IGSGSGSARA KTTLAEVSSP LSALADDVLL QILGRLEADP RDWARASCAS PRLAALLRAA CLPPRLSRAL PAELLPAPPP DGAPAAWAAL
101: HKLSVCCPGL LRAGVLLEPT DDFGLELDIG PDVPIICAPT DAASVEGFEA TATSRDVVVA AGGSAPGGAG ESANNAAAWS LYDDLYLDAA YDCSSEPQIP
201: PASAEPAAPP PSSVAAIRDV DGATTTTNAA ASCGGVARRG VVAGSRRHPR RWLGTVGAHL ASGSWTLSRE QGNKLLASRF RGDRLYLCDW PGCVHAEERR
301: KYMVFRGVFH NFARSQVRRA LRDTRRPTVA VECAFCGCKE AWDLYSAFCL RGFYGYHDDG EPVVRAYVCE NGHVAGAWTE RPLYS

Best Arabidopsis Sequence Match ( AT4G02440.1 )
(BLAST)

001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT

Arabidopsis Description

EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.