Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G232200.1 | Wheat | cytosol | 87.78 | 86.34 |
| TraesCS1B01G244300.1 | Wheat | cytosol | 88.33 | 85.71 |
| TraesCS1A01G229800.1 | Wheat | cytosol | 86.94 | 84.59 |
| Os05t0365000-00 | Rice | cytosol | 75.28 | 76.77 |
| Zm00001d009918_P001 | Maize | cytosol | 71.67 | 68.98 |
| EES18088 | Sorghum | cytosol | 71.67 | 67.01 |
| GSMUA_Achr11P... | Banana | cytosol | 53.61 | 56.27 |
| GSMUA_Achr8P10140_001 | Banana | plastid | 52.5 | 45.76 |
| KRH68185 | Soybean | nucleus | 41.11 | 45.26 |
| CDY50384 | Canola | cytosol | 41.11 | 44.58 |
| AT4G02440.1 | Thale cress | cytosol | 41.39 | 44.35 |
| CDY22051 | Canola | cytosol | 40.83 | 44.28 |
| Solyc09g075080.2.1 | Tomato | cytosol | 39.72 | 44.0 |
| VIT_07s0005g00340.t01 | Wine grape | cytosol | 45.83 | 43.19 |
| PGSC0003DMT400029665 | Potato | cytosol, endoplasmic reticulum, nucleus | 39.72 | 43.07 |
| Bra036266.1-P | Field mustard | cytosol | 41.94 | 36.92 |
Protein Annotations
| MapMan:19.2.2.8.1.4.6 | MapMan:26.1.1.3.4 | UniProt:A0A287FSR8 | InterPro:F-box-like_dom_sf | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009585 | GO:GO:0009605 |
| GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010099 | GO:GO:0048366 | GO:GO:0048573 |
| EnsemblPlantsGene:HORVU1Hr1G058630 | EnsemblPlants:HORVU1Hr1G058630.1 | PANTHER:PTHR31348 | PANTHER:PTHR31348:SF4 | SUPFAM:SSF81383 | UniParc:UPI000B47F64F |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:427856216..427858176
Molecular Weight (calculated)
39057.1 Da
IEP (calculated)
5.947
GRAVY (calculated)
-0.304
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAEHKDME IAVAKRRRDG KEPAEEEPLA ALADDVLLQI LGRLEGDPRD WARASCASPR LAALLRAACF PPRLSRALPA ELLPADGAPA AWAALHKMSV
101: CCPGLLRAGI LLEPTDDFGL ELDIGPDLTV PASSSSSSLE PTATSSLQPP KTAEPAQKPS DGTLAAADAA AWSLYDDLYL DAAYDCSETQ VAAAPGPAAE
201: AEEEKPPAAN AVRRGVVSGT RRRPRRWLGP VGAHLASGSW TLSREQGNKL LASRFRGDRL YICEWPGCVH AEERRKYMVF RGVFQDFARS QVRRALRDTR
301: RPTVAVDCAF CGCTEAWDLY SAFCLRSFHG YHDDGEPVVR AYVCENGHVA GAWTERPLYS
101: CCPGLLRAGI LLEPTDDFGL ELDIGPDLTV PASSSSSSLE PTATSSLQPP KTAEPAQKPS DGTLAAADAA AWSLYDDLYL DAAYDCSETQ VAAAPGPAAE
201: AEEEKPPAAN AVRRGVVSGT RRRPRRWLGP VGAHLASGSW TLSREQGNKL LASRFRGDRL YICEWPGCVH AEERRKYMVF RGVFQDFARS QVRRALRDTR
301: RPTVAVDCAF CGCTEAWDLY SAFCLRSFHG YHDDGEPVVR AYVCENGHVA GAWTERPLYS
001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
Arabidopsis Description
EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.