Factsheet for Zm00001d009918_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18088	Sorghum	cytosol	79.14	76.88
Os05t0365000-00	Rice	cytosol	68.72	72.8
HORVU1Hr1G058630.1	Barley	cytosol	68.98	71.67
TraesCS1D01G232200.1	Wheat	cytosol	67.91	69.4
TraesCS1A01G229800.1	Wheat	cytosol	68.45	69.19
TraesCS1B01G244300.1	Wheat	cytosol	67.38	67.92
GSMUA_Achr11P...	Banana	cytosol	47.06	51.31
Solyc09g075080.2.1	Tomato	cytosol	39.84	45.85
KRH68185	Soybean	nucleus	39.57	45.26
PGSC0003DMT400029665	Potato	cytosol, endoplasmic reticulum, nucleus	39.3	44.28
AT4G02440.1	Thale cress	cytosol	39.57	44.05
CDY50384	Canola	cytosol	39.04	43.98
CDY22051	Canola	cytosol	38.77	43.67
VIT_07s0005g00340.t01	Wine grape	cytosol	43.85	42.93
GSMUA_Achr8P10140_001	Banana	plastid	46.79	42.37
Bra036266.1-P	Field mustard	cytosol	39.04	35.7

Protein Annotations

MapMan:19.2.2.8.1.4.6	MapMan:26.1.1.3.4	ProteinID:AQK93068.1	InterPro:F-box-like_dom_sf	GO:GO:0000003	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0009585	GO:GO:0009605
GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0010099	GO:GO:0048366	GO:GO:0048573
UniProt:K7UYK7	PANTHER:PTHR31348	PANTHER:PTHR31348:SF4	SUPFAM:SSF81383	UniParc:UPI000221C13C	EnsemblPlantsGene:Zm00001d009918
EnsemblPlants:Zm00001d009918_P001	EnsemblPlants:Zm00001d009918_T001	SEG:seg	:	:	:

Description

Phytochrome A-associated F-box protein

Coordinates

chr8:-:89376858..89377982

Molecular Weight (calculated)

40333.5 Da

IEP (calculated)

6.110

GRAVY (calculated)

-0.202

Length

374 amino acids

Sequence
(BLAST)

001: MDEQQAEEGE SARVKRTPEE GSSPLSALAD DVLLQILGRL EADPRDWARA SCASPRLAAL LRAACLPPRL SRALPAELLP APSPDGAPAA WAALHKLSVC
101: CPGLLRAGVL LEPTDDFGLD LDIGPDVPIY ARTDASSAEG FEATATSRHS GTIVAAGSAP RAGESANVAA WSLYDDLYLD AAYDCSSELQ IPPAAAAVEP
201: APPAPVAAIR DVEEATTTNA VSCGVARRGV VAGSRLHPRR WLGTVGAHLA SGSWTLSREQ GNKLLASRFR GDRLYLCDWP GCVHKEERRK YMVFRGVFHN
301: FARSQVRRAL RDTRRPTVAV ECAFCGCKET WDLYSAFCLR SFYGYHDDGE PVVRAYVCEN GHVAGAWTDR PLYS

Best Arabidopsis Sequence Match ( AT4G02440.1 )
(BLAST)

001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT

Arabidopsis Description

EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.