Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G232200.1 | Wheat | cytosol | 87.84 | 88.8 |
| TraesCS1B01G244300.1 | Wheat | cytosol | 88.65 | 88.41 |
| HORVU1Hr1G058630.1 | Barley | cytosol | 84.59 | 86.94 |
| Os05t0365000-00 | Rice | cytosol | 75.41 | 79.04 |
| Zm00001d009918_P001 | Maize | cytosol | 69.19 | 68.45 |
| EES18088 | Sorghum | cytosol | 70.81 | 68.05 |
| GSMUA_Achr11P... | Banana | cytosol | 52.16 | 56.27 |
| GSMUA_Achr8P10140_001 | Banana | plastid | 51.89 | 46.49 |
| AT4G02440.1 | Thale cress | cytosol | 41.08 | 45.24 |
| CDY50384 | Canola | cytosol | 40.27 | 44.88 |
| KRH68185 | Soybean | nucleus | 39.46 | 44.65 |
| Solyc09g075080.2.1 | Tomato | cytosol | 38.92 | 44.31 |
| CDY22051 | Canola | cytosol | 39.73 | 44.28 |
| PGSC0003DMT400029665 | Potato | cytosol, endoplasmic reticulum, nucleus | 39.19 | 43.67 |
| VIT_07s0005g00340.t01 | Wine grape | cytosol | 43.78 | 42.41 |
| Bra036266.1-P | Field mustard | cytosol | 41.08 | 37.16 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G229800.1 | EnsemblPlantsGene:TraesCS1A01G229800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR31348 | PANTHER:PTHR31348:SF4 | SEG:seg | SUPFAM:SSF81383 | MapMan:19.2.2.8.1.4.6 | MapMan:26.1.1.3.4 |
Description
No Description!
Coordinates
chr1A:-:402277379..402278773
Molecular Weight (calculated)
40013.0 Da
IEP (calculated)
5.195
GRAVY (calculated)
-0.258
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAEHKEIA VVAAKRRRDG KEEAAAAEEE VVEPLSALAD DVLLQILGRL EGDPRDWARA SCASPRLAAL LRAACFPPRL SRALPAELLP ADGAPAAWAA
101: LHKMSVCCPG LLRAGILLEP SDDFGLELDI GPDLTVPASS SSSSSSLEPT ATSSLQPPRT AEPEPKPSDA LAAADAAAWS LYDDLYLDAA YDCSETQIAA
201: APAPAATAEA EEEEKPPAAN TARRGVVSGT RRRARRWLGP VGAHLASGSW TLSREQGNKL LASRFRGDRL YICEWPGCVH AEERRKYMVF RGVFQDFARS
301: QVRRALRDTR RPTVAVDCAF CGCTEAWDLY SAFCLRSFYG YHDDGEPVVR AYVCENGHVA GAWTERPLYA
101: LHKMSVCCPG LLRAGILLEP SDDFGLELDI GPDLTVPASS SSSSSSLEPT ATSSLQPPRT AEPEPKPSDA LAAADAAAWS LYDDLYLDAA YDCSETQIAA
201: APAPAATAEA EEEEKPPAAN TARRGVVSGT RRRARRWLGP VGAHLASGSW TLSREQGNKL LASRFRGDRL YICEWPGCVH AEERRKYMVF RGVFQDFARS
301: QVRRALRDTR RPTVAVDCAF CGCTEAWDLY SAFCLRSFYG YHDDGEPVVR AYVCENGHVA GAWTERPLYA
001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
Arabidopsis Description
EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.