Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029665 | Potato | cytosol, endoplasmic reticulum, nucleus | 92.92 | 90.96 |
| CDY50384 | Canola | cytosol | 60.92 | 59.64 |
| AT4G02440.1 | Thale cress | cytosol | 61.54 | 59.52 |
| CDY22051 | Canola | cytosol | 60.0 | 58.73 |
| VIT_07s0005g00340.t01 | Wine grape | cytosol | 65.85 | 56.02 |
| KRH68185 | Soybean | nucleus | 53.54 | 53.21 |
| GSMUA_Achr11P... | Banana | cytosol | 55.69 | 52.77 |
| Bra036266.1-P | Field mustard | cytosol | 60.62 | 48.17 |
| GSMUA_Achr8P10140_001 | Banana | plastid | 54.77 | 43.1 |
| Os05t0365000-00 | Rice | cytosol | 46.77 | 43.06 |
| Zm00001d009918_P001 | Maize | cytosol | 45.85 | 39.84 |
| HORVU1Hr1G058630.1 | Barley | cytosol | 44.0 | 39.72 |
| TraesCS1D01G232200.1 | Wheat | cytosol | 44.62 | 39.62 |
| TraesCS1B01G244300.1 | Wheat | cytosol | 44.62 | 39.08 |
| TraesCS1A01G229800.1 | Wheat | cytosol | 44.31 | 38.92 |
| EES18088 | Sorghum | cytosol | 45.85 | 38.7 |
Protein Annotations
| EnsemblPlants:Solyc09g075080.2.1 | EnsemblPlantsGene:Solyc09g075080.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR31348 | PANTHER:PTHR31348:SF4 | PFAM:PF00646 | SEG:seg |
| SUPFAM:SSF81383 | UniParc:UPI000276B95C | UniProt:K4CV85 | MapMan:19.2.2.8.1.4.6 | MapMan:26.1.1.3.4 | : |
Description
No Description!
Coordinates
chr9:-:66892871..66895825
Molecular Weight (calculated)
36791.3 Da
IEP (calculated)
6.382
GRAVY (calculated)
-0.311
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNSCMVDGF FSKLSEDLIL NIFFKLEDDP RNWARLSCVS TKFAFLIHTI CYKSKCSATI PSVVSDLVSS TSSCPPGGWS SLYKLAVCCP GLHQAGVLLE
101: NSDFGLEREI GPDESYSGRV FPKAELIPSS SSNNNNRCDS GEVVDCGWSL FDDLMFDTVY DASESSSNQI EVVEEEPTSF VVNPTRLSKR RKIYRSPCSH
201: LASGVWNLSR EQGNKLLASR FKGDCLYICD WPGCIHMEEK RNYMLFRGIF KNFKQSRVWR TINDGNRKID LNCAFCSSKQ TWDLHSAFCL RRYFGYHDDG
301: EPVVRAYVCE NGHVSGAWTD WPLYT
101: NSDFGLEREI GPDESYSGRV FPKAELIPSS SSNNNNRCDS GEVVDCGWSL FDDLMFDTVY DASESSSNQI EVVEEEPTSF VVNPTRLSKR RKIYRSPCSH
201: LASGVWNLSR EQGNKLLASR FKGDCLYICD WPGCIHMEEK RNYMLFRGIF KNFKQSRVWR TINDGNRKID LNCAFCSSKQ TWDLHSAFCL RRYFGYHDDG
301: EPVVRAYVCE NGHVSGAWTD WPLYT
001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
Arabidopsis Description
EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.