Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G244300.1 | Wheat | cytosol | 93.17 | 91.91 |
| TraesCS1A01G229800.1 | Wheat | cytosol | 88.8 | 87.84 |
| HORVU1Hr1G058630.1 | Barley | cytosol | 86.34 | 87.78 |
| Os05t0365000-00 | Rice | cytosol | 74.86 | 77.62 |
| Zm00001d009918_P001 | Maize | cytosol | 69.4 | 67.91 |
| EES18088 | Sorghum | cytosol | 71.04 | 67.53 |
| GSMUA_Achr11P... | Banana | cytosol | 51.91 | 55.39 |
| GSMUA_Achr8P10140_001 | Banana | plastid | 52.19 | 46.25 |
| AT4G02440.1 | Thale cress | cytosol | 41.26 | 44.94 |
| KRH68185 | Soybean | nucleus | 39.89 | 44.65 |
| Solyc09g075080.2.1 | Tomato | cytosol | 39.62 | 44.62 |
| CDY50384 | Canola | cytosol | 40.44 | 44.58 |
| CDY22051 | Canola | cytosol | 39.89 | 43.98 |
| PGSC0003DMT400029665 | Potato | cytosol, endoplasmic reticulum, nucleus | 39.34 | 43.37 |
| VIT_07s0005g00340.t01 | Wine grape | cytosol | 45.08 | 43.19 |
| Bra036266.1-P | Field mustard | cytosol | 40.98 | 36.67 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G232200.1 | EnsemblPlantsGene:TraesCS1D01G232200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| ncoils:Coil | PANTHER:PTHR31348 | PANTHER:PTHR31348:SF4 | SEG:seg | SUPFAM:SSF81383 | MapMan:19.2.2.8.1.4.6 |
| MapMan:26.1.1.3.4 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:320582386..320583486
Molecular Weight (calculated)
39467.5 Da
IEP (calculated)
5.739
GRAVY (calculated)
-0.235
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAEHKEIA VVAAKRRRDG KEEAAAAAEE AEPLSALADD VLLQILGRLE GDPRDWARAS CASPRLAALL RAACFPPRLS RALPAELLPA DGAPAAWAAL
101: HKMSVCCPGL LRAGVLLEPS DDFGLELDIG PDLTVPASSS SSLEPTATSS LQPPKAAAQA EPRPSDDTLA TADAAAWSLY DDLYLDAAYD CSETQIAAAP
201: APAATAEEKE APPAANAVRR GVVSGTRRRA RRWLGPVGAH LASGSWTLSR EQGNKLLASR FRGDRLYICE WPGCVHAEER RKYMVFRGVF QDFARSQVRR
301: ALRDTRRPTV AVDCAFCGCT EAWDLYSAFC LRSFYGYHDD GEPVVRAYVC ENGHVAGAWT ERPLYA
101: HKMSVCCPGL LRAGVLLEPS DDFGLELDIG PDLTVPASSS SSLEPTATSS LQPPKAAAQA EPRPSDDTLA TADAAAWSLY DDLYLDAAYD CSETQIAAAP
201: APAATAEEKE APPAANAVRR GVVSGTRRRA RRWLGPVGAH LASGSWTLSR EQGNKLLASR FRGDRLYICE WPGCVHAEER RKYMVFRGVF QDFARSQVRR
301: ALRDTRRPTV AVDCAFCGCT EAWDLYSAFC LRSFYGYHDD GEPVVRAYVC ENGHVAGAWT ERPLYA
001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
Arabidopsis Description
EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.