Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G232200.1 | Wheat | cytosol | 91.91 | 93.17 |
TraesCS1A01G229800.1 | Wheat | cytosol | 88.41 | 88.65 |
HORVU1Hr1G058630.1 | Barley | cytosol | 85.71 | 88.33 |
Os05t0365000-00 | Rice | cytosol | 73.58 | 77.34 |
EES18088 | Sorghum | cytosol | 70.08 | 67.53 |
Zm00001d009918_P001 | Maize | cytosol | 67.92 | 67.38 |
GSMUA_Achr11P... | Banana | cytosol | 52.29 | 56.56 |
GSMUA_Achr8P10140_001 | Banana | plastid | 50.94 | 45.76 |
AT4G02440.1 | Thale cress | cytosol | 41.24 | 45.54 |
KRH68185 | Soybean | nucleus | 39.89 | 45.26 |
CDY50384 | Canola | cytosol | 40.43 | 45.18 |
Solyc09g075080.2.1 | Tomato | cytosol | 39.08 | 44.62 |
CDY22051 | Canola | cytosol | 39.89 | 44.58 |
PGSC0003DMT400029665 | Potato | cytosol, endoplasmic reticulum, nucleus | 39.35 | 43.98 |
VIT_07s0005g00340.t01 | Wine grape | cytosol | 45.01 | 43.72 |
Bra036266.1-P | Field mustard | cytosol | 40.97 | 37.16 |
Protein Annotations
EnsemblPlants:TraesCS1B01G244300.1 | EnsemblPlantsGene:TraesCS1B01G244300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
PANTHER:PTHR31348 | PANTHER:PTHR31348:SF4 | SEG:seg | SUPFAM:SSF81383 | MapMan:19.2.2.8.1.4.6 | MapMan:26.1.1.3.4 |
Description
No Description!
Coordinates
chr1B:+:433597905..433599333
Molecular Weight (calculated)
39932.9 Da
IEP (calculated)
5.314
GRAVY (calculated)
-0.232
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAEQQQQG EIAVVVAKRR RDGKEAAAAA EEVEPLSALA DDVLLQILGR LEGDPRDWAR ASCASPRLAA LLRAACFPPR LSRALPAELL PADGAPAAWA
101: ALHKMSVCCP GLLRAGILLE PSDDFGLELD IGPDLTVPAS SSSSSSSLEP TATSSLQPPK AAAQAEPRPS DGTLAATDAA AWSLYDDLYL DAAYDCSETQ
201: IAAAPAPAAT AEEEEAPPAA NAVRRGVVSG TRRRARRWLG PVGSHLASGS WTLSREQGNK LLASRFRGDR LYICEWPGCV HAEERRKYMV FRGVFQDFAR
301: SQVRRALRDT RRPTVAVDCA FCGCTEAWDL YSAFCLRSFY GYHDDGEPVV RAYVCENGHV AGAWTERPLY A
101: ALHKMSVCCP GLLRAGILLE PSDDFGLELD IGPDLTVPAS SSSSSSSLEP TATSSLQPPK AAAQAEPRPS DGTLAATDAA AWSLYDDLYL DAAYDCSETQ
201: IAAAPAPAAT AEEEEAPPAA NAVRRGVVSG TRRRARRWLG PVGSHLASGS WTLSREQGNK LLASRFRGDR LYICEWPGCV HAEERRKYMV FRGVFQDFAR
301: SQVRRALRDT RRPTVAVDCA FCGCTEAWDL YSAFCLRSFY GYHDDGEPVV RAYVCENGHV AGAWTERPLY A
001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
Arabidopsis Description
EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.