Factsheet for Os05t0365000-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G229800.1	Wheat	cytosol	79.04	75.41
HORVU1Hr1G058630.1	Barley	cytosol	76.77	75.28
TraesCS1D01G232200.1	Wheat	cytosol	77.62	74.86
TraesCS1B01G244300.1	Wheat	cytosol	77.34	73.58
EES18088	Sorghum	cytosol	75.35	69.09
Zm00001d009918_P001	Maize	cytosol	72.8	68.72
GSMUA_Achr11P...	Banana	cytosol	54.39	55.98
Solyc09g075080.2.1	Tomato	cytosol	43.06	46.77
CDY50384	Canola	cytosol	42.78	45.48
PGSC0003DMT400029665	Potato	cytosol, endoplasmic reticulum, nucleus	42.78	45.48
GSMUA_Achr8P10140_001	Banana	plastid	52.97	45.28
AT4G02440.1	Thale cress	cytosol	42.78	44.94
KRH68185	Soybean	nucleus	41.36	44.65
CDY22051	Canola	cytosol	41.93	44.58
VIT_07s0005g00340.t01	Wine grape	cytosol	46.46	42.93
Bra036266.1-P	Field mustard	cytosol	42.78	36.92

Protein Annotations

MapMan:19.2.2.8.1.4.6	MapMan:26.1.1.3.4	EntrezGene:9272149	ProteinID:AAS79732.1	ProteinID:AAU10848.1	ProteinID:AAV32237.1
ProteinID:BAH93115.1	ProteinID:BAS93633.1	InterPro:F-box-like_dom_sf	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0009585	GO:GO:0009605	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0010099	GO:GO:0048366	GO:GO:0048573	EnsemblPlantsGene:Os05g0365000
EnsemblPlants:Os05t0365000-00	PANTHER:PTHR31348	PANTHER:PTHR31348:SF4	UniProt:Q75IT7	SUPFAM:SSF81383	UniParc:UPI0000351DA7
RefSeq:XP_015637798.1	SEG:seg	:	:	:	:

Description

Conserved hypothetical protein. (Os05t0365000-00)

Coordinates

chr5:+:17497491..17498604

Molecular Weight (calculated)

37579.1 Da

IEP (calculated)

7.355

GRAVY (calculated)

-0.251

Length

353 amino acids

Sequence
(BLAST)

001: MSADEDAASR GGGGGGKRKA VAEGGSPSPL SVLADDVLLQ ILGRLEGDPR DWARASCASP RLAALLRAAC LPPRLTRALP AELLPPPSPD GAPRAWAALH
101: KLSVCCPGLL RAGVLLEPSD DFGLELDIGP DLSVPAPSPS SSSLDHASTA TSAPAPPPDS SSSSAAAATT WSLYDDLYLD TAYDCSPSEA AQISNTAATP
201: APAAARRGVA SGSRRRARRW LGTVGAHLAS GSWTLSREQG NKLLASRFRG DRLYICDWPG CVHAEERRKY MVFRGVFHDF PRSQVRRALR DTRRPTVAVD
301: CAFCGCTEAW DLYAAFCLRS FYGYHDDGEP VVRAYVCENG HVAGAWTERP LYS

Best Arabidopsis Sequence Match ( AT4G02440.1 )
(BLAST)

001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT

Arabidopsis Description

EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.