Factsheet for Bra036266.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003735.1-P
Bra008231.1-P
Bra012213.1-P
Bra012214.1-P
Bra012216.1-P
Bra014159.1-P
Bra014519.1-P
Bra015801.1-P
Bra018756.1-P
Bra018757.1-P
Bra025795.1-P
Bra039504.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02440.1	Bra012213.1-P	AT1G20140.1	16412087
AT4G02440.1	Bra012214.1-P	AT1G20140.1	16412087
AT4G02440.1	Bra012216.1-P	AT1G20140.1	16412087
AT4G02440.1	Bra025795.1-P	AT1G20140.1	16412087
AT4G02440.1	Bra003735.1-P	AT1G75950.1	12795696
AT4G02440.1	Bra008231.1-P	AT1G75950.1	12795696
AT4G02440.1	Bra015801.1-P	AT1G75950.1	12795696
AT4G02440.1	Bra003735.1-P	AT1G75950.1	16412087
AT4G02440.1	Bra008231.1-P	AT1G75950.1	16412087
AT4G02440.1	Bra015801.1-P	AT1G75950.1	16412087
AT4G02440.1	Bra039504.1-P	AT2G03170.1	16412087
AT4G02440.1	Bra014519.1-P	AT3G21850.1	16412087
AT4G02440.1	Bra039504.1-P	AT3G25650.1	16412087
AT4G02440.1	Bra014159.1-P	AT3G60010.1	16412087
AT4G02440.1	Bra018756.1-P	AT3G60010.1	16412087
AT4G02440.1	Bra018757.1-P	AT3G60010.1	16412087

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22051	Canola	cytosol	75.55	93.07
AT4G02440.1	Thale cress	cytosol	66.99	81.55
Solyc09g075080.2.1	Tomato	cytosol	48.17	60.62
PGSC0003DMT400029665	Potato	cytosol, endoplasmic reticulum, nucleus	48.66	59.94
KRH68185	Soybean	nucleus	44.74	55.96
VIT_07s0005g00340.t01	Wine grape	cytosol	49.88	53.4
GSMUA_Achr11P...	Banana	cytosol	44.01	52.48
Os05t0365000-00	Rice	cytosol	36.92	42.78
GSMUA_Achr8P10140_001	Banana	plastid	43.03	42.62
HORVU1Hr1G058630.1	Barley	cytosol	36.92	41.94
TraesCS1A01G229800.1	Wheat	cytosol	37.16	41.08
TraesCS1D01G232200.1	Wheat	cytosol	36.67	40.98
TraesCS1B01G244300.1	Wheat	cytosol	37.16	40.97
EES18088	Sorghum	cytosol	36.92	39.22
Zm00001d009918_P001	Maize	cytosol	35.7	39.04

Protein Annotations

MapMan:19.2.2.8.1.4.6	MapMan:26.1.1.3.4	EnsemblPlantsGene:Bra036266	EnsemblPlants:Bra036266.1	EnsemblPlants:Bra036266.1-P	InterPro:F-box-like_dom_sf
GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009585	GO:GO:0009605	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0010099
GO:GO:0048366	GO:GO:0048573	UniProt:M4F5B0	PANTHER:PTHR31348	PANTHER:PTHR31348:SF4	SUPFAM:SSF81383
UniParc:UPI0002541F8A	SEG:seg	:	:	:	:

Description

AT4G02440 (E=2e-096) EID1 | EID1 (EMPFINDLICHER IM DUNKELROTEN LICHT 1); ubiquitin-protein ligase

Coordinates

chrA09:-:183251..184480

Molecular Weight (calculated)

44533.6 Da

IEP (calculated)

7.568

GRAVY (calculated)

-0.355

Length

409 amino acids

Sequence
(BLAST)

001: MAEAGCFSFI PEDVVFNIFF KLQDDPRNWA RLACVCTKFS SIVRNVCCKK LCYSSIPTVV SELLPSPSAA SASSSLPPPG GWASLYKLAV CCPGLHHAGI
101: LLENSDFGLE RELGPDQSLD PKPKPAGPGL VSKQIGSGLE TPSFHSASKQ IESGLETPSF QPASKPHGPG LVETPSFQPD SKPVGSGSET PSFQSVSKQI
201: GSGLEPTTPF KSVSKQVGSS TETQSFWSLY DDLYTDTLSA PPEASVTEPQ EPTEPSEIRP GRGDLPAKKR RKISRSLGSH LAHGGWSLSR EQGTKLLASR
301: FRGDCLYICN WPGCIHVEEK RNYMLFRGVF KDFKRSRVWR TINEDGGGRS KVTGLKCAFC ACDDTWDMHS SFCLRRVFGF HDDGEPVVRA YVCENGHVSG
401: AWTALPLYT

Best Arabidopsis Sequence Match ( AT4G02440.1 )
(BLAST)

001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT

Arabidopsis Description

EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.