Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P10140_001 | Banana | plastid | 76.38 | 63.44 |
| PGSC0003DMT400029665 | Potato | cytosol, endoplasmic reticulum, nucleus | 53.94 | 55.72 |
| Solyc09g075080.2.1 | Tomato | cytosol | 52.77 | 55.69 |
| KRH68185 | Soybean | nucleus | 51.9 | 54.43 |
| Os05t0365000-00 | Rice | cytosol | 55.98 | 54.39 |
| CDY22051 | Canola | cytosol | 52.48 | 54.22 |
| AT4G02440.1 | Thale cress | cytosol | 53.06 | 54.17 |
| CDY50384 | Canola | cytosol | 51.9 | 53.61 |
| HORVU1Hr1G058630.1 | Barley | cytosol | 56.27 | 53.61 |
| TraesCS1B01G244300.1 | Wheat | cytosol | 56.56 | 52.29 |
| TraesCS1A01G229800.1 | Wheat | cytosol | 56.27 | 52.16 |
| TraesCS1D01G232200.1 | Wheat | cytosol | 55.39 | 51.91 |
| VIT_07s0005g00340.t01 | Wine grape | cytosol | 56.27 | 50.52 |
| Zm00001d009918_P001 | Maize | cytosol | 51.31 | 47.06 |
| EES18088 | Sorghum | cytosol | 51.9 | 46.23 |
| Bra036266.1-P | Field mustard | cytosol | 52.48 | 44.01 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P05570_001 | EnsemblPlants:GSMUA_Achr11T05570_001 | EnsemblPlantsGene:GSMUA_Achr11G05570_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR31348 | PANTHER:PTHR31348:SF4 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI000294C36E |
| UniProt:M0RPN7 | MapMan:19.2.2.8.1.4.6 | MapMan:26.1.1.3.4 | : | : | : |
Description
Phytochrome A-associated F-box protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G05570_001]
Coordinates
chr11:+:4139845..4141974
Molecular Weight (calculated)
37415.2 Da
IEP (calculated)
7.758
GRAVY (calculated)
-0.206
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLPSSSASS TAATPTTDSG GASSPFALLS DDIVLNILAK LEVDPRDWAR LACVSARLSY LVRNVCYRSR CCRSLPSDLL PSAAASSAAA WPSLHKISVC
101: CPGLLRAGIL LEHSDFGLER DIGPHIFVPP LSSSSSSSSS STSSDPPNPL PLIPSEAADS CWSLFDDLYF DTVYDHSESQ DATLTPIDPS PGEPPVRVGS
201: VAPKKRKKQR VGPVGSHLAS GPWSLSREQG NKLLASRFRG DCLYICDWPG CIHAEEKRKY MLFRGVFKNF KRSRVWKTIS DSNRGKIALD CAFCACRETW
301: DLHSAFCLRR VFGFHDDGEP VVRAYVCENG HVSGAWTERP LYA
101: CPGLLRAGIL LEHSDFGLER DIGPHIFVPP LSSSSSSSSS STSSDPPNPL PLIPSEAADS CWSLFDDLYF DTVYDHSESQ DATLTPIDPS PGEPPVRVGS
201: VAPKKRKKQR VGPVGSHLAS GPWSLSREQG NKLLASRFRG DCLYICDWPG CIHAEEKRKY MLFRGVFKNF KRSRVWKTIS DSNRGKIALD CAFCACRETW
301: DLHSAFCLRR VFGFHDDGEP VVRAYVCENG HVSGAWTERP LYA
001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
Arabidopsis Description
EID1Phytochrome A-associated F-box protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LEA8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.