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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • golgi 1
  • cytosol 3
  • mitochondrion 1
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93699 Canola cytosol 99.38 99.38
Bra018756.1-P Field mustard cytosol 75.62 77.56
Bra008231.1-P Field mustard cytosol 68.75 68.75
AT3G60010.1 Thale cress cytosol 65.62 68.18
Bra003735.1-P Field mustard cytosol 68.12 68.12
Bra014159.1-P Field mustard cytosol 65.62 66.04
Bra015801.1-P Field mustard cytosol 66.25 65.84
Bra025795.1-P Field mustard cytosol 61.88 61.49
Bra014519.1-P Field mustard cytosol 59.38 59.75
Bra012214.1-P Field mustard cytosol 46.88 55.97
Bra012216.1-P Field mustard cytosol 51.88 51.88
Bra039504.1-P Field mustard cytosol 53.12 50.3
Bra012213.1-P Field mustard cytosol 46.25 48.68
Bra017397.1-P Field mustard cytosol 48.12 48.43
Protein Annotations
MapMan:19.2.2.8.1.1Gene3D:3.30.710.10EnsemblPlantsGene:Bra018757EnsemblPlants:Bra018757.1EnsemblPlants:Bra018757.1-PGO:GO:0006511
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0019538UniProt:M4DQG4
PFAM:PF01466PFAM:PF03931PIRSF:PIRSF028729PANTHER:PTHR11165PANTHER:PTHR11165:SF89InterPro:SKP1
InterPro:SKP1-likeInterPro:SKP1-like_dim_sfInterPro:SKP1/BTB/POZ_sfSMART:SM00512SUPFAM:SSF54695SUPFAM:SSF81382
InterPro:Skp1_comp_POZInterPro:Skp1_comp_dimerUniParc:UPI000253EC5DSEG:seg::
Description
AT1G75950 (E=5e-056) SKP1, ASK1, ATSKP1, SKP1A, UIP1 | SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1); protein binding / ubiquitin-protein ligase
Coordinates
chrA06:+:2168607..2169089
Molecular Weight (calculated)
17709.8 Da
IEP (calculated)
4.035
GRAVY (calculated)
-0.176
Length
160 amino acids
Sequence
(BLAST)
001: MSASRHIVLK SSDGETFEVE EAVALQSQTI AHMVEDDCID GGIPLANITG VILAKVIEYC KKHVTVVPDG DGNSSSSLEE ELKNWDAEFL SNIDQSTLFH
101: LIMAANFLNI KDLLDLTCQA VADMIKGKSP EEIRAQLNIE NDFTPEEEAQ IRAENQWAFE
Best Arabidopsis Sequence Match ( AT1G20140.1 )
(BLAST)
001: MAETKKMIIL KSSDGESFEI EEAVAVKSQT IKHMIEDDCA DNGIPLPNVT GAILAKVIEY CKKHVEAAAE AGGDKDFYGS AENDELKNWD SEFVKVDQPT
101: LFDLILAANY LNIGGLLDLT CKAVADQMRG KTPEQMRAHF NIKNDYTPEE EAEVRNENKW AFE
Arabidopsis Description
ASK4SK4 [Source:UniProtKB/TrEMBL;Acc:A0A178W187]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.