Factsheet for Bra014802.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001736.1-P
Bra005565.1-P
Bra012213.1-P
Bra012214.1-P
Bra012216.1-P
Bra014159.1-P
Bra014519.1-P
Bra018756.1-P
Bra018757.1-P
Bra021808.1-P
Bra022391.1-P
Bra022897.1-P
Bra025795.1-P
Bra039504.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54650.1	Bra039504.1-P	AT1G10230.1	19277118
AT3G54650.1	Bra012213.1-P	AT2G25700.1	19277118
AT3G54650.1	Bra012214.1-P	AT2G25700.1	19277118
AT3G54650.1	Bra012216.1-P	AT2G25700.1	19277118
AT3G54650.1	Bra025795.1-P	AT2G25700.1	19277118
AT3G54650.1	Bra005565.1-P	AT2G32710.1	18948957
AT3G54650.1	Bra021808.1-P	AT2G32710.1	18948957
AT3G54650.1	Bra022897.1-P	AT2G32710.1	18948957
AT3G54650.1	Bra001736.1-P	AT3G19150.1	18948957
AT3G54650.1	Bra022391.1-P	AT3G19150.1	18948957
AT3G54650.1	Bra014519.1-P	AT3G21860.1	19277118
AT3G54650.1	Bra014159.1-P	AT3G60010.1	19277118
AT3G54650.1	Bra018756.1-P	AT3G60010.1	19277118
AT3G54650.1	Bra018757.1-P	AT3G60010.1	19277118

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64339	Canola	plastid	65.01	89.93
CDY55831	Canola	mitochondrion	50.7	80.04
Bra007086.1-P	Field mustard	plastid	57.09	77.07
AT3G54650.1	Thale cress	plastid	55.94	73.86
VIT_07s0141g00330.t01	Wine grape	plastid	42.91	58.54
KRH71335	Soybean	nucleus	42.66	56.61
GSMUA_Achr4P28520_001	Banana	cytosol, mitochondrion	33.59	56.08
Solyc09g065880.2.1	Tomato	nucleus	41.89	55.41
Os03t0633400-01	Rice	extracellular, vacuole	23.75	55.36
KRH32101	Soybean	nucleus	41.38	54.73
PGSC0003DMT400049672	Potato	nucleus	41.51	54.62
KRH67292	Soybean	cytosol	37.16	54.6
GSMUA_Achr4P21010_001	Banana	mitochondrion	33.97	54.4
Solyc06g084060.2.1	Tomato	cytosol, nucleus, plastid	41.0	54.31
PGSC0003DMT400051898	Potato	cytosol	40.74	54.07
KRG95622	Soybean	nucleus, plastid	41.0	53.5
GSMUA_Achr2P12640_001	Banana	plastid	37.55	52.31
KRG90050	Soybean	cytosol	3.7	50.0
TraesCS5A01G378400.1	Wheat	plastid	35.63	49.29
TraesCS5D01G388400.1	Wheat	plastid	35.25	49.2
Os12t0601000-00	Rice	plastid	34.99	48.93
TraesCS5B01G382000.4	Wheat	plastid	32.57	48.57
Zm00001d030990_P001	Maize	cytosol	36.02	47.47
EER93780	Sorghum	plastid	35.5	46.8
TraesCS5A01G058400.2	Wheat	plastid	35.5	46.49
Zm00001d041414_P002	Maize	cytosol	35.5	46.33
TraesCS5D01G069500.1	Wheat	plastid	34.99	45.97
TraesCS5B01G058300.1	Wheat	plastid	34.99	45.9
Zm00001d033321_P001	Maize	plastid	33.46	45.41
OQU79521	Sorghum	plastid	35.38	44.82
HORVU5Hr1G014320.7	Barley	plastid	35.25	40.41
HORVU5Hr1G093590.1	Barley	extracellular	29.89	39.93
HORVU5Hr1G093570.1	Barley	plastid	8.05	37.95
Os03t0633100-00	Rice	plastid	8.43	32.04

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	InterPro:Basic_leucine-zipper_C
EnsemblPlantsGene:Bra014802	EnsemblPlants:Bra014802.1	EnsemblPlants:Bra014802.1-P	ncoils:Coil	InterPro:F-box-like_dom_sf	GO:GO:0003674
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtyp	UniProt:M4DE83	PFAM:PF00170	PFAM:PF12498	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR44840	PANTHER:PTHR44840:SF1	SMART:SM00338	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF57959
SUPFAM:SSF81383	UniParc:UPI0002544EB7	InterPro:bZIP	SEG:seg	:	:

Description

AT3G54650 (E=6e-200) FBL17 | FBL17; ubiquitin-protein ligase

Coordinates

chrA04:+:3261374..3266220

Molecular Weight (calculated)

85619.4 Da

IEP (calculated)

8.279

GRAVY (calculated)

-0.303

Length

783 amino acids

Sequence
(BLAST)

001: MQPQPQPHIS PTSAQAAISA ALKSQRLRKN RGSYSCGRCG QPKKGHVCHL PPPPLDVPAT PIAPEPLASV SISAAASSST RPPAPSRQPF THLRRALSFD
101: DDEARDSRFH AAGLWEVLKR LPPSGLLMAA RVCRGWRETA GKMWKAAEEL RIRVPERAQI GYVGSLLQKC PALVRLSLKS REFDATTIAC IAFSCPNLEV
201: LEISTYGAAV NRISGDELGR FVSNKRGLRS LKMEGCSSLG GFTLASTSLS TLWLADLHSL SKMIFNCPNL IELSLEFSLQ EDDSTDLVAM IDGLGRTCTR
301: LQNIHIASLK LSHTFVLALT AVNFRDLRML SLVLGIDITD ASVAAISSTY TNLELLDLSG SSITDTGLGM ICDALPDTLS KLLVALCPNI TSSGIQFATA
401: QLPLLELMDC GMSVSDPTSD NLTFEEKSST PQKASGYNQK MFIKHKRLKK LSLWGGSSLD ALFLNCPELK DLNLNSCSNL QPESLVLQCP KLELVSASGC
501: QNLLIGAIRK QVSENFAAGE NHMPLKRLAD ASKRIQAPPS LYQEHFDKFI LLGSVVAQTS PDASSVRSVP STSIQKKLDV PATQATSISS RDDSDDDDLD
601: GDADNGDPTD VKRARRMLSN RESARRSRRR KQEQMNEFDT QAGQLRGEHS TLLSRLSDMN HKCDAAAVDN RILRADIETL RTKVKMVEET VKRVTGVNPL
701: HWARPNMGTP LNNTPSDSSR ILPNSNHVLE PAIPSTTNAG LASNQRVERA NLLPEQVNRE GMQNQFATNP NLYETLLHWN HKH

Best Arabidopsis Sequence Match ( AT3G54650.1 )
(BLAST)

001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH

Arabidopsis Description

FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.