Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G069500.1 | Wheat | plastid | 97.65 | 97.82 |
| TraesCS5A01G058400.2 | Wheat | plastid | 93.13 | 92.98 |
| HORVU5Hr1G014320.7 | Barley | plastid | 92.13 | 80.53 |
| Os12t0601000-00 | Rice | plastid | 72.19 | 76.96 |
| Zm00001d030990_P001 | Maize | cytosol | 69.35 | 69.7 |
| Zm00001d041414_P002 | Maize | cytosol | 68.51 | 68.17 |
| OQU79521 | Sorghum | plastid | 67.5 | 65.21 |
| TraesCS5B01G382000.4 | Wheat | plastid | 56.28 | 64.0 |
| GSMUA_Achr4P21010_001 | Banana | mitochondrion | 47.07 | 57.46 |
| GSMUA_Achr4P28520_001 | Banana | cytosol, mitochondrion | 45.06 | 57.36 |
| GSMUA_Achr2P12640_001 | Banana | plastid | 52.93 | 56.23 |
| VIT_07s0141g00330.t01 | Wine grape | plastid | 49.25 | 51.22 |
| KRG90050 | Soybean | cytosol | 4.86 | 50.0 |
| CDY64339 | Canola | plastid | 46.73 | 49.29 |
| KRH67292 | Soybean | cytosol | 43.89 | 49.16 |
| CDX73462 | Canola | plastid | 45.23 | 48.21 |
| CDX78253 | Canola | plastid | 45.23 | 48.13 |
| KRG95622 | Soybean | nucleus, plastid | 47.74 | 47.5 |
| CDY55831 | Canola | mitochondrion | 39.36 | 47.38 |
| PGSC0003DMT400051898 | Potato | cytosol | 46.73 | 47.29 |
| KRH71335 | Soybean | nucleus | 46.57 | 47.12 |
| Solyc09g065880.2.1 | Tomato | nucleus | 46.57 | 46.96 |
| Solyc06g084060.2.1 | Tomato | cytosol, nucleus, plastid | 46.4 | 46.87 |
| KRH32101 | Soybean | nucleus | 46.23 | 46.62 |
| PGSC0003DMT400049672 | Potato | nucleus | 46.4 | 46.55 |
| Bra007086.1-P | Field mustard | plastid | 45.23 | 46.55 |
| AT3G54650.1 | Thale cress | plastid | 45.23 | 45.53 |
| Bra014802.1-P | Field mustard | plastid | 45.9 | 34.99 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G058300.1 | EnsemblPlantsGene:TraesCS5B01G058300 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44840 |
| PANTHER:PTHR44840:SF2 | PFAM:PF00646 | SEG:seg | SUPFAM:SSF52047 | SUPFAM:SSF81383 | MapMan:19.2.2.8.1.4.6 |
Description
No Description!
Coordinates
chr5B:+:64253396..64257778
Molecular Weight (calculated)
63939.7 Da
IEP (calculated)
8.273
GRAVY (calculated)
0.036
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDALSVV PAPDAAAAPA QPAVAKKRGS YNCGRCGLPK KGHVCSIPGP PAAGAGAAPA AEHKPRRALH FDEAAAAGGA LDATPVAVAY PAPHRPPEKK
101: ARVDVVDVDD SEPESGAVVR QGLVAVGSGV RVPGEVVIEV LRRLAPRAVA ASAAVSRGWR DCARRVWRGA EELRLRAAGV STIGTLLPRC PALSRLVLRM
201: ESDVDATMLA CLAFSCPNMQ SLEISMADSA VNRMTGDELT RFISEKKSLT VLKVDRCSGL GFLNINSTSL STLWLSDLSS LTKSVINCPN LSELSLIFSQ
301: QDNDSTDLIS MMDSLGRTCS NLRKLHISSI HLCNEAVFAL GSANLRGLCM LSLLLGKKIT DAAVASIVRS FTSLELLDLS GSCITDNGLG MVSKAFPDTL
401: TRLLLAMCPN ITSYGVQVAT AQLPLLQLMD CGKSLCANVQ PEAPRSYFGD LNGGIRFCSK LQITRKQQPT YQKLIIKHAN LKKLSLWGCS GIDALCVNCP
501: ELNDLNLNSC INLNPERLLL QCPSLKDVHV TGCRDMLIGA IRNQVLNEFA AAEPRMPCKR LADGSKRVQV PQFMLEQQFE DEKWCGESRR SQCAVHI
101: ARVDVVDVDD SEPESGAVVR QGLVAVGSGV RVPGEVVIEV LRRLAPRAVA ASAAVSRGWR DCARRVWRGA EELRLRAAGV STIGTLLPRC PALSRLVLRM
201: ESDVDATMLA CLAFSCPNMQ SLEISMADSA VNRMTGDELT RFISEKKSLT VLKVDRCSGL GFLNINSTSL STLWLSDLSS LTKSVINCPN LSELSLIFSQ
301: QDNDSTDLIS MMDSLGRTCS NLRKLHISSI HLCNEAVFAL GSANLRGLCM LSLLLGKKIT DAAVASIVRS FTSLELLDLS GSCITDNGLG MVSKAFPDTL
401: TRLLLAMCPN ITSYGVQVAT AQLPLLQLMD CGKSLCANVQ PEAPRSYFGD LNGGIRFCSK LQITRKQQPT YQKLIIKHAN LKKLSLWGCS GIDALCVNCP
501: ELNDLNLNSC INLNPERLLL QCPSLKDVHV TGCRDMLIGA IRNQVLNEFA AAEPRMPCKR LADGSKRVQV PQFMLEQQFE DEKWCGESRR SQCAVHI
001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH
Arabidopsis Description
FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.