Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G240600.1 | Wheat | plastid | 37.8 | 53.93 |
| GSMUA_Achr10P... | Banana | cytosol | 22.83 | 50.0 |
| GSMUA_Achr9P27040_001 | Banana | cytosol, mitochondrion, nucleus | 22.05 | 47.46 |
| EER99015 | Sorghum | plastid | 31.5 | 47.06 |
| TraesCS5D01G247100.1 | Wheat | plastid | 41.73 | 40.46 |
| HORVU5Hr1G068770.6 | Barley | nucleus | 44.09 | 35.9 |
| KRH04631 | Soybean | plastid | 31.5 | 23.81 |
| PGSC0003DMT400066394 | Potato | nucleus | 34.65 | 22.92 |
| KRH57804 | Soybean | plastid | 31.5 | 21.74 |
| VIT_07s0031g00800.t01 | Wine grape | plastid | 33.86 | 20.28 |
| KRH71159 | Soybean | nucleus, plastid | 27.56 | 19.89 |
| KRH50258 | Soybean | nucleus, plastid | 29.13 | 19.79 |
| KRH76992 | Soybean | nucleus, plastid | 30.71 | 19.7 |
| Solyc01g108610.2.1 | Tomato | nucleus | 33.07 | 19.27 |
| KRH28480 | Soybean | plastid | 29.92 | 18.54 |
| Bra001736.1-P | Field mustard | nucleus | 24.41 | 17.51 |
| VIT_03s0063g00670.t01 | Wine grape | nucleus | 29.92 | 17.35 |
| GSMUA_Achr2P22370_001 | Banana | nucleus | 28.35 | 17.31 |
| CDY28100 | Canola | nucleus | 25.2 | 17.3 |
| CDX99264 | Canola | nucleus | 23.62 | 17.05 |
| CDX92305 | Canola | nucleus | 23.62 | 17.05 |
| AT1G49620.3 | Thale cress | nucleus | 26.77 | 17.0 |
| CDY22987 | Canola | nucleus | 25.2 | 16.67 |
| Bra018812.1-P | Field mustard | nucleus | 21.26 | 16.36 |
| CDY50958 | Canola | nucleus | 21.26 | 16.27 |
| CDX82309 | Canola | nucleus | 24.41 | 16.23 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 27.56 | 15.77 |
| PGSC0003DMT400040785 | Potato | nucleus | 23.62 | 13.82 |
| AT3G19150.1 | Thale cress | nucleus | 21.26 | 13.78 |
| Solyc02g090680.2.1 | Tomato | nucleus | 22.05 | 13.21 |
| Bra022391.1-P | Field mustard | nucleus | 13.39 | 11.72 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G238600.1 | EnsemblPlantsGene:TraesCS5B01G238600 | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0030234 | InterPro:CDI | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF39 | PFAM:PF02234 | PIRSF:PIRSF017811 |
| SEG:seg | MapMan:13.1.1.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:419517613..419518919
Molecular Weight (calculated)
13552.2 Da
IEP (calculated)
10.194
GRAVY (calculated)
-0.045
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAAAIVT ATAAASSCSK RESVGIAAPA DLSVSSSLPS FSSRHGAGRS KPCCCVWSSL LTLWLLPVVV RRTKKAKKGR SPPAEEMEAF FAAAEGDVAR
101: RFAAKYNYNV VTDAPMDGRY EWVRVRP
101: RFAAKYNYNV VTDAPMDGRY EWVRVRP
001: MSLREMSETK PKRDSEYEGS NIKRMRLDDD DDVLRSPTRT LSSSSSSSLA YSVSDSGGFC SVALSEEEDD HLSSSISSGC SSSETNEIAT RLPFSDLEAH
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP
Arabidopsis Description
KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.